Rosetta RNA structure prediction

Author	Message
Max DesGeorges Send message Joined: 1 Oct 05 Posts: 35 Credit: 942,527 RAC: 0	Message 59263 - Posted: 3 Feb 2009, 18:04:43 UTC Does Rosetta software perform structure predictions of RNA molecule too? Is there anybody that could post me a link were read more about that? ID: 59263 · Rating: 0 · rate: / Reply Quote

Max DesGeorges Send message Joined: 1 Oct 05 Posts: 35 Credit: 942,527 RAC: 0	Message 59464 - Posted: 8 Feb 2009, 16:53:38 UTC - in response to Message 59263. I have found this. Any news? Robetta server performs RNA structure predictions? ID: 59464 · Rating: 0 · rate: / Reply Quote

rochester new york Send message Joined: 2 Jul 06 Posts: 2842 Credit: 2,020,043 RAC: 0	Message 59474 - Posted: 9 Feb 2009, 0:02:12 UTC - in response to Message 59464. http://robetta.bakerlab.org/ I have found this. Any news? Robetta server performs RNA structure predictions? ID: 59474 · Rating: 0 · rate: / Reply Quote

Mod.Sense Volunteer moderator Send message Joined: 22 Aug 06 Posts: 4018 Credit: 0 RAC: 0	Message 59478 - Posted: 9 Feb 2009, 4:48:03 UTC Manuel, the answer to your question is certainly yes. BakerLab is studying RNA structures as well. And yes, those same algorythms get used on Robetta as well. Robetta is sort of a laboratory service, whereas Rosetta@home is the public project to improve the basic science used to make the program. I dug up a few links. I hope it will get you started. They are not always sending RNA work units out, but they have in the past. Review of the release logs thread shows several updates and improvements in RNA energy functions. It was discussed in Dr Baker's journal, and the thread on discussion thereof, and the paper that was published and analysis of 1dtj There was also a thread called "Why RNA folding" Rosetta Moderator: Mod.Sense ID: 59478 · Rating: 0 · rate: / Reply Quote

Max DesGeorges Send message Joined: 1 Oct 05 Posts: 35 Credit: 942,527 RAC: 0	Message 59497 - Posted: 10 Feb 2009, 8:41:11 UTC - in response to Message 59478. Last modified: 10 Feb 2009, 8:41:35 UTC Thank you for the answer. I don't know why i miss that threads. ID: 59497 · Rating: 0 · rate: / Reply Quote

Mod.Sense Volunteer moderator Send message Joined: 22 Aug 06 Posts: 4018 Credit: 0 RAC: 0	Message 59501 - Posted: 10 Feb 2009, 14:28:31 UTC Most of the posts were about 2 years old, and the search doesn't seem to dig that deep anymore. I had to dig where I knew I would find these things from having been here during that period of time. Rosetta Moderator: Mod.Sense ID: 59501 · Rating: 0 · rate: / Reply Quote