Minirosetta v1.34 bug thread

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Bob Browett

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Message 56387 - Posted: 15 Oct 2008, 18:15:27 UTC - in response to Message 56373.  

Bob those same tasks failed on systems prior to yours.
Rosetta has to try 2 systems to make sure its not just a single computer that failed.

It looks like you got a bad batch of abinitio_nohomfrag_70_A tasks.


100 bad units at once!! I call that more than bad luck. I call that a credit crunch.
I better nationalise Rosetta. How much do you want David?
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Profile Greg_BE
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Message 56391 - Posted: 15 Oct 2008, 20:45:14 UTC - in response to Message 56387.  

Bob those same tasks failed on systems prior to yours.
Rosetta has to try 2 systems to make sure its not just a single computer that failed.

It looks like you got a bad batch of abinitio_nohomfrag_70_A tasks.


100 bad units at once!! I call that more than bad luck. I call that a credit crunch.
I better nationalise Rosetta. How much do you want David?



tell you what, make a seperate post about this issue and include a random sample of say 15-20 of the failed work units, use a brief description and then link to the results page of those failed units so someone can see the kind of error message you are getting. Especially those with long debug threads.
The needs psp filters is just a general non destruct message, but I saw that one of those crashed as well. You get all kinds of access errors, but heck if I understand all that code.

I have no idea how you could get so unlucky as everything I have had for that specific type of task has gone through with flying colors and then some for credit. Better luck with the next batch.
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Mike Tyka

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Message 56392 - Posted: 16 Oct 2008, 2:52:20 UTC - in response to Message 56387.  

Which WUs are failing for you ?


Bob those same tasks failed on systems prior to yours.
Rosetta has to try 2 systems to make sure its not just a single computer that failed.

It looks like you got a bad batch of abinitio_nohomfrag_70_A tasks.


100 bad units at once!! I call that more than bad luck. I call that a credit crunch.
I better nationalise Rosetta. How much do you want David?


http://beautifulproteins.blogspot.com/
http://www.miketyka.com/
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Bob Browett

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Message 56393 - Posted: 16 Oct 2008, 5:45:48 UTC

Hi
No time this morning, but I'll put together a seperate post when I get home from work tonight
BB
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Bob Browett

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Message 56395 - Posted: 16 Oct 2008, 15:55:42 UTC

Ok
Here are 20 failed units, they fall into 2 groups, but both groups kick off the de-bugger, so plenty of data for you to look at. These 20 are a sample of the over 100 failed units I have had over the past couple of days.

GROUP 1
All have Unhandled Exception Detected:
Reason: Access Violation
WU's 179956887,182305278,182305277,182305270,181975176,181983734,17953667,17953682,
181952367

GROUP 2
All have Unhandled Exception Detected:
Reason: Access Violation
followed by:
needs psipred_ss2 to run filters

WU's
182305297,182305281,182305269,182305267,179654709,181983826,18198272,181953671,
181953669,181953659,181953656

All these units ran on Computer ID 910018

Hope that gives you enough data to be going along with

Regards
Bob The Brit
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Message 56396 - Posted: 16 Oct 2008, 17:31:10 UTC

My system:
Mon 13 Oct 2008 06:25:47 PM PDT||Starting BOINC client version 5.10.45 for x86_64-pc-linux-gnu
Mon 13 Oct 2008 06:25:47 PM PDT||log flags: task, file_xfer, sched_ops
Mon 13 Oct 2008 06:25:47 PM PDT||Libraries: libcurl/7.18.0 OpenSSL/0.9.8g zlib/1.2.3.3 libidn/1.1
Mon 13 Oct 2008 06:25:47 PM PDT||Data directory: /var/lib/boinc-client
Mon 13 Oct 2008 06:25:47 PM PDT||Processor: 1 AuthenticAMD AMD Athlon(tm) 64 Processor 3200+ [Family 15 Model 4 Stepping 8]
Mon 13 Oct 2008 06:25:47 PM PDT||Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 syscall nx mmxext lm 3dnowext 3dnow up rep_good
Mon 13 Oct 2008 06:25:47 PM PDT||OS: Linux: 2.6.24-19-generic
Mon 13 Oct 2008 06:25:47 PM PDT||Memory: 500.03 MB physical, 2.79 GB virtual
Mon 13 Oct 2008 06:25:47 PM PDT||Disk: 73.92 GB total, 67.03 GB free
Mon 13 Oct 2008 06:25:47 PM PDT||Local time is UTC -7 hours


Having trouble with

Tue 14 Oct 2008 06:08:26 AM PDT|rosetta@home|Finished upload of abinitio_nohomfrag_70_A_1o7uA_4466_59685_0_0
Tue 14 Oct 2008 07:09:19 AM PDT|rosetta@home|Starting hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0
Tue 14 Oct 2008 07:09:19 AM PDT|rosetta@home|Starting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 07:39:40 AM PDT|rosetta@home|Sending scheduler request: To fetch work.  Requesting 55 seconds of work, reporting 1 completed tasks
Tue 14 Oct 2008 07:39:45 AM PDT|rosetta@home|Scheduler request succeeded: got 1 new tasks
Tue 14 Oct 2008 07:39:46 AM PDT|rosetta@home|Started download of 1faa.pdb.gz
Tue 14 Oct 2008 07:39:46 AM PDT|rosetta@home|Started download of boinc_aa1faaA03_05.200_v1_3.gz
Tue 14 Oct 2008 07:39:48 AM PDT|rosetta@home|Finished download of 1faa.pdb.gz
Tue 14 Oct 2008 07:39:48 AM PDT|rosetta@home|Started download of boinc_aa1faaA09_05.200_v1_3.gz
Tue 14 Oct 2008 07:40:08 AM PDT|rosetta@home|Finished download of boinc_aa1faaA03_05.200_v1_3.gz
Tue 14 Oct 2008 07:40:24 AM PDT|rosetta@home|Finished download of boinc_aa1faaA09_05.200_v1_3.gz
Tue 14 Oct 2008 08:34:03 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 08:52:20 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:11:13 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:30:10 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:52:08 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:09:14 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:26:15 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:43:15 AM PDT|rosetta@home|Restarting task

Removed some lines to save some space here, but the same messages repeat until my system felt the need to run CPU benchmarks. This system is configured to switch every hour to Einstein and back, but somehow hasn't for several days while it tries to work this out.
Wed 15 Oct 2008 03:29:49 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Wed 15 Oct 2008 03:35:59 PM PDT||Running CPU benchmarks
Wed 15 Oct 2008 03:35:59 PM PDT||Suspending computation - running CPU benchmarks
Wed 15 Oct 2008 03:36:31 PM PDT||Benchmark results:
Wed 15 Oct 2008 03:36:31 PM PDT||   Number of CPUs: 1
Wed 15 Oct 2008 03:36:31 PM PDT||   1822 floating point MIPS (Whetstone) per CPU
Wed 15 Oct 2008 03:36:31 PM PDT||   5190 integer MIPS (Dhrystone) per CPU
Wed 15 Oct 2008 03:36:32 PM PDT||Resuming computation
Wed 15 Oct 2008 03:47:36 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Wed 15 Oct 2008 04:04:50 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Wed 15 Oct 2008 04:21:58 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Wed 15 Oct 2008 04:39:06 PM PDT|rosetta@home|Restarting task

Then, these are the most recent. I have aborted ones that run more than 20 hours of CPU time in the past, but read this entry and decided to ask instead
  Thu 16 Oct 2008 08:55:41 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Thu 16 Oct 2008 09:12:48 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Thu 16 Oct 2008 09:29:55 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Thu 16 Oct 2008 09:47:12 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Thu 16 Oct 2008 10:04:06 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134

Found my default cc_config.xml
I assume you mean you want us to switch
<cpu_sched>[b]0[/b]</cpu_sched>
    <cpu_sched_debug>[b]0[/b]</cpu_sched_debug>

to
<cpu_sched>[b]1[/b]</cpu_sched>
    <cpu_sched_debug>[b]1[/b]</cpu_sched_debug>

and then re-read?
I will post results in a bit



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Pepo
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Message 56397 - Posted: 16 Oct 2008, 17:56:23 UTC - in response to Message 56396.  

Tue 14 Oct 2008 09:11:13 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:30:10 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134

Removed some lines to save some space here, but the same messages repeat

Could you leave maybe at least one full cycle unstriped?

Found my default cc_config.xml
I assume you mean you want us to switch to
<cpu_sched>[b]1[/b]</cpu_sched>
    <cpu_sched_debug>[b]1[/b]</cpu_sched_debug>

Maybe also <task_debug>?

Peter
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Message 56398 - Posted: 16 Oct 2008, 18:04:35 UTC

By full cycle do you mean one whole day/ 24 hours?

I have made the changes to the cc_config.xml including debug and will post shortly
Here is one full day of the log:
 Tue 14 Oct 2008 12:11:22 AM PDT|rosetta@home|Resuming task abinitio_nohomfrag_70_A_1o4wA_4466_56039_0 using minirosetta version 134
Tue 14 Oct 2008 12:28:35 AM PDT|rosetta@home|Computation for task abinitio_nohomfrag_70_A_1o4wA_4466_56039_0 finished
Tue 14 Oct 2008 12:28:35 AM PDT|rosetta@home|Starting abinitio_nohomfrag_70_A_1o7uA_4466_59685_0
Tue 14 Oct 2008 12:28:36 AM PDT|rosetta@home|Starting task abinitio_nohomfrag_70_A_1o7uA_4466_59685_0 using minirosetta version 134
Tue 14 Oct 2008 12:28:39 AM PDT|rosetta@home|Started upload of abinitio_nohomfrag_70_A_1o4wA_4466_56039_0_0
Tue 14 Oct 2008 12:28:45 AM PDT|rosetta@home|Finished upload of abinitio_nohomfrag_70_A_1o4wA_4466_56039_0_0
Tue 14 Oct 2008 01:02:50 AM PDT|rosetta@home|Sending scheduler request: To fetch work.  Requesting 92 seconds of work, reporting 1 completed tasks
Tue 14 Oct 2008 01:02:55 AM PDT|rosetta@home|Scheduler request succeeded: got 1 new tasks
Tue 14 Oct 2008 01:02:56 AM PDT|rosetta@home|Started download of foldcst_simple.foldcst_simple.t305_.mtyka.flags.boinc
Tue 14 Oct 2008 01:02:56 AM PDT|rosetta@home|Started download of foldcst_simple.foldcst_simple.t305_.mtyka.boinc_files.zip
Tue 14 Oct 2008 01:02:59 AM PDT|rosetta@home|Finished download of foldcst_simple.foldcst_simple.t305_.mtyka.flags.boinc
Tue 14 Oct 2008 01:04:07 AM PDT|rosetta@home|Finished download of foldcst_simple.foldcst_simple.t305_.mtyka.boinc_files.zip
Tue 14 Oct 2008 01:29:26 AM PDT|Einstein@Home|Resuming task h1_0955.10_S5R4__1033_S5R4a_3 using einstein_S5R4 version 602
Tue 14 Oct 2008 03:04:10 AM PDT|rosetta@home|Resuming task abinitio_nohomfrag_70_A_1o7uA_4466_59685_0 using minirosetta version 134
Tue 14 Oct 2008 04:11:41 AM PDT|Einstein@Home|Resuming task h1_0955.10_S5R4__1033_S5R4a_3 using einstein_S5R4 version 602
Tue 14 Oct 2008 04:58:53 AM PDT|Einstein@Home|Sending scheduler request: To fetch work.  Requesting 81 seconds of work, reporting 0 completed tasks
Tue 14 Oct 2008 04:58:58 AM PDT|Einstein@Home|Scheduler request succeeded: got 1 new tasks
Tue 14 Oct 2008 05:12:39 AM PDT|rosetta@home|Resuming task abinitio_nohomfrag_70_A_1o7uA_4466_59685_0 using minirosetta version 134
Tue 14 Oct 2008 06:08:19 AM PDT|rosetta@home|Computation for task abinitio_nohomfrag_70_A_1o7uA_4466_59685_0 finished
Tue 14 Oct 2008 06:08:19 AM PDT|Einstein@Home|Resuming task h1_0955.10_S5R4__1033_S5R4a_3 using einstein_S5R4 version 602
Tue 14 Oct 2008 06:08:21 AM PDT|rosetta@home|Started upload of abinitio_nohomfrag_70_A_1o7uA_4466_59685_0_0
Tue 14 Oct 2008 06:08:26 AM PDT|rosetta@home|Finished upload of abinitio_nohomfrag_70_A_1o7uA_4466_59685_0_0
Tue 14 Oct 2008 07:09:19 AM PDT|rosetta@home|Starting hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0
Tue 14 Oct 2008 07:09:19 AM PDT|rosetta@home|Starting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 07:39:40 AM PDT|rosetta@home|Sending scheduler request: To fetch work.  Requesting 55 seconds of work, reporting 1 completed tasks
Tue 14 Oct 2008 07:39:45 AM PDT|rosetta@home|Scheduler request succeeded: got 1 new tasks
Tue 14 Oct 2008 07:39:46 AM PDT|rosetta@home|Started download of 1faa.pdb.gz
Tue 14 Oct 2008 07:39:46 AM PDT|rosetta@home|Started download of boinc_aa1faaA03_05.200_v1_3.gz
Tue 14 Oct 2008 07:39:48 AM PDT|rosetta@home|Finished download of 1faa.pdb.gz
Tue 14 Oct 2008 07:39:48 AM PDT|rosetta@home|Started download of boinc_aa1faaA09_05.200_v1_3.gz
Tue 14 Oct 2008 07:40:08 AM PDT|rosetta@home|Finished download of boinc_aa1faaA03_05.200_v1_3.gz
Tue 14 Oct 2008 07:40:24 AM PDT|rosetta@home|Finished download of boinc_aa1faaA09_05.200_v1_3.gz
Tue 14 Oct 2008 08:34:03 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 08:52:20 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:11:13 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:30:10 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:52:08 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:09:14 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:26:15 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:43:15 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 11:00:15 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 11:17:17 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 11:34:17 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 11:51:16 AM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 12:08:18 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 12:25:18 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 12:42:24 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 12:59:26 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 01:16:25 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 01:33:25 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 01:50:26 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 02:07:26 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 02:24:26 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 02:41:28 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 02:58:28 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 03:15:34 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 03:32:34 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 03:49:34 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 04:06:34 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 04:23:36 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 04:40:35 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 04:57:36 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 05:14:36 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 05:31:37 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 05:48:38 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 06:05:44 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 06:22:45 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 06:39:51 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 06:56:54 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 07:13:59 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 07:30:58 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 07:48:06 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 08:05:06 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 08:22:07 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 08:39:08 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 08:56:08 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:13:15 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:30:16 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 09:47:15 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:04:17 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:21:17 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:38:16 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 10:55:18 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 11:12:23 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 11:29:23 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134
Tue 14 Oct 2008 11:46:24 PM PDT|rosetta@home|Restarting task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 using minirosetta version 134

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Message 56399 - Posted: 16 Oct 2008, 18:10:06 UTC

The log file is going to be huge. Updates every couple of seconds due to CPU throttling (set at 85%)
Is there some other place or way to post this you'd prefer?
Or is this what you were expecting:
Thu 16 Oct 2008 11:09:25 AM PDT||[cpu_sched] Suspending - CPU throttle
Thu 16 Oct 2008 11:09:25 AM PDT|rosetta@home|[cpu_sched] Preempting hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 (left in memory)
Thu 16 Oct 2008 11:09:25 AM PDT|rosetta@home|[task_debug] task_state=SUSPENDED for hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 from suspend
Thu 16 Oct 2008 11:09:26 AM PDT||[cpu_sched] Resuming - CPU throttle

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Message 56402 - Posted: 17 Oct 2008, 10:14:29 UTC - in response to Message 56399.  

By full cycle do you mean one whole day/ 24 hours?

Nooo, not the whole day. I've meant one full row of messages between two restarts - it is around 17 minutes in your case. (you've said that "the same messages repeat").

The log file is going to be huge. Updates every couple of seconds due to CPU throttling (set at 85%)

OMG :-) understand!

Or is this what you were expecting:
Thu 16 Oct 2008 11:09:25 AM PDT||[cpu_sched] Suspending - CPU throttle
Thu 16 Oct 2008 11:09:25 AM PDT|rosetta@home|[cpu_sched] Preempting hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 (left in memory)
Thu 16 Oct 2008 11:09:25 AM PDT|rosetta@home|[task_debug] task_state=SUSPENDED for hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 from suspend
Thu 16 Oct 2008 11:09:26 AM PDT||[cpu_sched] Resuming - CPU throttle

I was expecting to see anything but throttling :-) If your machine will manage it for the few minutes, you could please temporarily set it off.

Peter
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Message 56406 - Posted: 17 Oct 2008, 17:31:36 UTC

Turned off throttling as you can see in the messages below, but it looks like the dang thing completed before another event. Arghh! Total CPU time 32:19:32
Posted here in case you see something anyway. Could the throttling have caused the problem? I throttle many of my BOINC CPUs due to heat issues; Small room; no air; Trying to keep the cost of operating down...
Anyway here's what I got (including the upload):
Fri 17 Oct 2008 08:44:27 AM PDT||[cpu_sched] Resuming - CPU throttle
Fri 17 Oct 2008 08:44:27 AM PDT|rosetta@home|[cpu_sched] Resuming hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0
Fri 17 Oct 2008 08:44:27 AM PDT|rosetta@home|[task_debug] task_state=EXECUTING for hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 from unsuspend
Fri 17 Oct 2008 08:44:28 AM PDT||General prefs: from rosetta@home (last modified 19-Nov-2007 23:27:22)
Fri 17 Oct 2008 08:44:28 AM PDT||Host location: home
Fri 17 Oct 2008 08:44:28 AM PDT||General prefs: no separate prefs for home; using your defaults
Fri 17 Oct 2008 08:44:28 AM PDT||Reading preferences override file
Fri 17 Oct 2008 08:44:28 AM PDT||Preferences limit memory usage when active to 250.02MB
Fri 17 Oct 2008 08:44:28 AM PDT||Preferences limit memory usage when idle to 450.03MB
Fri 17 Oct 2008 08:44:28 AM PDT||Preferences limit disk usage to 9.31GB
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] Request CPU reschedule: Prefs update
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] Request CPU reschedule: Preferences override
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] schedule_cpus(): start
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906531 new 0.906513 wall 20.011470 CPU 16.600000 w 0.999768 e 0.829524
Fri 17 Oct 2008 08:44:28 AM PDT|Einstein@Home|[cpu_sched_debug] highest debt: 86400.000000 h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] scheduling (regular) h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] Request enforce CPU schedule: schedule_cpus
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:44:28 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:44:28 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:44:28 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 408.603487 tsc 97.103501
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:44:28 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:44:28 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:44:28 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:44:49 AM PDT||[cpu_sched_debug] Request CPU reschedule: Idle state change
Fri 17 Oct 2008 08:44:49 AM PDT||[cpu_sched_debug] schedule_cpus(): start
Fri 17 Oct 2008 08:44:49 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906513 new 0.906529 wall 21.124500 CPU 20.500000 w 0.999756 e 0.970437
Fri 17 Oct 2008 08:44:49 AM PDT|Einstein@Home|[cpu_sched_debug] highest debt: 86400.000000 h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:44:49 AM PDT||[cpu_sched_debug] scheduling (regular) h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:44:49 AM PDT||[cpu_sched_debug] Request enforce CPU schedule: schedule_cpus
Fri 17 Oct 2008 08:44:49 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:44:49 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:44:49 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:44:49 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 429.727987 tsc 118.228001
Fri 17 Oct 2008 08:44:49 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:44:49 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:44:49 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:44:49 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:45:00 AM PDT||[cpu_sched_debug] Request enforce CPU schedule: Checkpoint reached
Fri 17 Oct 2008 08:45:00 AM PDT|rosetta@home|[task_debug] result hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 checkpointed
Fri 17 Oct 2008 08:45:00 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:45:00 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:45:00 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:45:00 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 440.775985 tsc 0.000000
Fri 17 Oct 2008 08:45:00 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:45:00 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:45:00 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:45:00 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:45:28 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906529 new 0.906562 wall 39.172000 CPU 38.400000 w 0.999547 e 0.980292
Fri 17 Oct 2008 08:46:00 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:46:00 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:46:00 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:46:00 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 501.035989 tsc 60.260004
Fri 17 Oct 2008 08:46:00 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:46:00 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:46:00 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:46:00 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:46:28 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906562 new 0.906607 wall 60.243996 CPU 58.500000 w 0.999303 e 0.971051
Fri 17 Oct 2008 08:47:00 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:47:00 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:47:00 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:47:00 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 561.271968 tsc 120.495983
Fri 17 Oct 2008 08:47:00 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:47:00 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:47:00 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:47:00 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:47:28 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906607 new 0.906667 wall 60.231988 CPU 59.800000 w 0.999303 e 0.992828
Fri 17 Oct 2008 08:48:01 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:48:01 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:48:01 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:48:01 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 621.499969 tsc 180.723984
Fri 17 Oct 2008 08:48:01 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:48:01 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:48:01 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:48:01 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:48:29 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906667 new 0.906729 wall 60.227993 CPU 59.900000 w 0.999303 e 0.994554
Fri 17 Oct 2008 08:49:01 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:49:01 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:49:01 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:49:01 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 681.731968 tsc 240.955983
Fri 17 Oct 2008 08:49:01 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:49:01 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:49:01 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:49:01 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:49:29 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906729 new 0.906803 wall 60.240003 CPU 61.000000 w 0.999303 e 1.012616
Fri 17 Oct 2008 08:50:01 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:50:01 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:50:01 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:50:01 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 741.971965 tsc 301.195980
Fri 17 Oct 2008 08:50:01 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:50:01 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:50:01 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:50:01 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:50:29 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906803 new 0.906864 wall 60.232002 CPU 59.900000 w 0.999303 e 0.994488
Fri 17 Oct 2008 08:51:01 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:51:01 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:51:01 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:51:01 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 802.199978 tsc 361.423993
Fri 17 Oct 2008 08:51:01 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:51:01 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:51:01 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:51:01 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:51:29 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906864 new 0.906925 wall 60.227998 CPU 59.900000 w 0.999303 e 0.994554
Fri 17 Oct 2008 08:52:01 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:52:01 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:52:01 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:52:01 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 862.427971 tsc 421.651986
Fri 17 Oct 2008 08:52:01 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:52:01 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:52:01 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:52:01 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:52:30 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906925 new 0.906986 wall 60.235999 CPU 59.900000 w 0.999303 e 0.994422
Fri 17 Oct 2008 08:53:02 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:53:02 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:53:02 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:53:02 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 922.667965 tsc 481.891980
Fri 17 Oct 2008 08:53:02 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:53:02 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:53:02 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:53:02 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:53:30 AM PDT||[cpu_sched_debug] CPU efficiency old 0.906986 new 0.907058 wall 60.240004 CPU 60.900000 w 0.999303 e 1.010956
Fri 17 Oct 2008 08:54:02 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:54:02 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:54:02 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:54:02 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 982.907968 tsc 542.131983
Fri 17 Oct 2008 08:54:02 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:54:02 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:54:02 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:54:02 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:54:30 AM PDT||[cpu_sched_debug] CPU efficiency old 0.907058 new 0.907119 wall 60.236006 CPU 59.900000 w 0.999303 e 0.994422
Fri 17 Oct 2008 08:55:02 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:55:02 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:55:02 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:55:02 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 1043.143969 tsc 602.367984
Fri 17 Oct 2008 08:55:02 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:55:02 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:55:02 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:55:02 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:55:30 AM PDT||[cpu_sched_debug] CPU efficiency old 0.907119 new 0.907181 wall 60.239991 CPU 60.000000 w 0.999303 e 0.996016
Fri 17 Oct 2008 08:56:02 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:56:02 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:56:02 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:56:02 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 1103.379969 tsc 662.603984
Fri 17 Oct 2008 08:56:02 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:56:02 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:56:02 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:56:02 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:56:31 AM PDT||[cpu_sched_debug] CPU efficiency old 0.907181 new 0.907240 wall 60.219999 CPU 59.700000 w 0.999303 e 0.991365
Fri 17 Oct 2008 08:57:03 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:57:03 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:57:03 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:57:03 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 1163.603966 tsc 722.827981
Fri 17 Oct 2008 08:57:03 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:57:03 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:57:03 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:57:03 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:57:31 AM PDT||[cpu_sched_debug] CPU efficiency old 0.907240 new 0.907298 wall 60.240000 CPU 59.700000 w 0.999303 e 0.991036
Fri 17 Oct 2008 08:58:03 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:58:03 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:58:03 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:58:03 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 1223.843967 tsc 783.067982
Fri 17 Oct 2008 08:58:03 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:58:03 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:58:03 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:58:03 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:58:31 AM PDT||[cpu_sched_debug] CPU efficiency old 0.907298 new 0.907370 wall 60.244001 CPU 60.900000 w 0.999303 e 1.010889
Fri 17 Oct 2008 08:59:03 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:59:03 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:59:03 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:59:03 AM PDT|Einstein@Home|[cpu_sched_debug] didn't preempt hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0: tr 1284.083975 tsc 843.307990
Fri 17 Oct 2008 08:59:03 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:59:03 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 1 task state 9
Fri 17 Oct 2008 08:59:03 AM PDT|rosetta@home|[cpu_sched_debug] hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 sched state 2 next 2 task state 1
Fri 17 Oct 2008 08:59:03 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:59:22 AM PDT|rosetta@home|[task_debug] Process for hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 exited
Fri 17 Oct 2008 08:59:22 AM PDT|rosetta@home|[task_debug] task_state=EXITED for hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 from handle_exit_external
Fri 17 Oct 2008 08:59:22 AM PDT|rosetta@home|[task_debug] exit status 0
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] Request CPU reschedule: application exited
Fri 17 Oct 2008 08:59:22 AM PDT|rosetta@home|Computation for task hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 finished
Fri 17 Oct 2008 08:59:22 AM PDT|rosetta@home|[task_debug] result state=FILES_UPLOADING for hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 from CS::app_finished
Fri 17 Oct 2008 08:59:22 AM PDT|rosetta@home|[csd|wfd] DCF: 0.437569->5.301729, raw_ratio 5.301729, adj_ratio 12.116327
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] Request CPU reschedule: handle_finished_apps
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] schedule_cpus(): start
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] CPU efficiency old 0.907370 new 0.907392 wall 51.195987 CPU 48.300000 w 0.999408 e 0.943433
Fri 17 Oct 2008 08:59:22 AM PDT|Einstein@Home|[cpu_sched_debug] highest debt: 86400.000000 h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] scheduling (regular) h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] Request enforce CPU schedule: schedule_cpus
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 08:59:22 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:59:22 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 08:59:22 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 1 next 2 task state 9
Fri 17 Oct 2008 08:59:22 AM PDT|Einstein@Home|[cpu_sched] Resuming h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 08:59:22 AM PDT|Einstein@Home|[task_debug] task_state=EXECUTING for h1_0955.10_S5R4__1033_S5R4a_3 from unsuspend
Fri 17 Oct 2008 08:59:22 AM PDT|Einstein@Home|Resuming task h1_0955.10_S5R4__1033_S5R4a_3 using einstein_S5R4 version 602
Fri 17 Oct 2008 08:59:22 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 08:59:24 AM PDT|rosetta@home|Started upload of hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0_0
Fri 17 Oct 2008 08:59:27 AM PDT|rosetta@home|Finished upload of hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0_0
Fri 17 Oct 2008 08:59:28 AM PDT|rosetta@home|[task_debug] result state=FILES_UPLOADED for hombench_mtyka_foldcst_simple_foldcst_simple_t305___4612_2720_0 from CS::update_results
Fri 17 Oct 2008 09:00:23 AM PDT||[cpu_sched_debug] enforce_schedule(): start
Fri 17 Oct 2008 09:00:23 AM PDT|Einstein@Home|[cpu_sched_debug] want to run: h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 09:00:23 AM PDT|Einstein@Home|[cpu_sched_debug] processing h1_0955.10_S5R4__1033_S5R4a_3
Fri 17 Oct 2008 09:00:23 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 is already running
Fri 17 Oct 2008 09:00:23 AM PDT||[cpu_sched_debug] finished preempt loop, nrunning 1
Fri 17 Oct 2008 09:00:23 AM PDT|Einstein@Home|[cpu_sched_debug] h1_0955.10_S5R4__1033_S5R4a_3 sched state 2 next 2 task state 1
Fri 17 Oct 2008 09:00:23 AM PDT||[cpu_sched_debug] enforce_schedule: end
Fri 17 Oct 2008 09:00:23 AM PDT||[cpu_sched_debug] CPU efficiency old 0.907392 new 0.907984 wall 60.584018 CPU 106.150000 w 0.999299 e 1.752112
Fri 17 Oct 2008 09:00:32 AM PDT||[cpu_sched_debug] Request enforce CPU schedule: Checkpoint reached

Thanks for your help/insight/debug tips.
If I get another, I'll know how to proceed
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Profile Greg_BE
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Message 56409 - Posted: 17 Oct 2008, 19:35:19 UTC

reaper, probably a dumb question, have you taken the side panel off your computer?
I had a heat problem with my dual core with the cover on, even though I have some open slot panels in the back it wasn't enough, so I took the side panel off and the fan is very quiet now and the temp does not get much above 161F/72C. The fan runs about 1900 RPM with both cores going 100%. And that is sitting in a wood enclosure of a computer desk with not much space around the sides.
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Mike Tyka

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Message 56410 - Posted: 17 Oct 2008, 20:39:13 UTC - in response to Message 56409.  


I'm not sure how this works, but if system preempts/suspends the job on a very regular basis, (in particular more frequently then we checkpoint) i guess the job might then run forever, since it never reaches the next checkpoint..

DEKIM - do you know how this works ?

Mike


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Message 56411 - Posted: 17 Oct 2008, 21:25:30 UTC

Mike, so long as the tasks are left in memory, they aren't restarting. The "suspend" that occurs to throttle CPU is not the same as the "suspend" that occurs when BOINC begins running another project for a period of time.

If a Rosetta task is restarted from the same checkpoint 5 times in a row (i.e. it has not progressed to another checkpoint), the Rosetta watchdog is to end the task. An example of where this tends to happen is a task that happens to have long running protein models combined with a PC that removes tasks from memory while suspended, and suspends while the computer is in use. The machine can pretty quickly go idle briefly and then in use a number of times in an afternoon. So long as the task has short models, you still make progress. But if the task happens to have long models, the watchdog steps in and decides this just isn't a good fit with how the machine is configured.

The thing I've been asked about, and wasn't sure of, is:

Does the above still pertain if we are on the first model of the task? Or is there a special case where the watchdog will not end a task that has not completed model 1?
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Saharak

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Message 56424 - Posted: 19 Oct 2008, 18:00:06 UTC

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Richard
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Message 56495 - Posted: 28 Oct 2008, 16:47:39 UTC

Could somebody help me?
I’ve installed BOINC Manager Version 6.2.19 from scratch in my new computer running Windows XP SP3. I’m running Seti@home and Rosetta@home projects. Both projects run mostly fine but when they starts to crunch a Rosetta Mini 1.34 WU Windows immediately shows the following error message: “minirosetta_1.34_windows_intelx85.exe has encountered a problem and needs to close…. Bla,bla….” When you ask for details, it shows the following: “szAppName: minirosetta_1.34_windows_intelx86.exe szAppVer: 0.0.0.0” and “szModName: ntdll.dll szModVer: 5.1.2600.5512 offset: 00010193”. Both Seti WU’s an Rossetta “classic” WU’s haven’t no problem, but as actually most Rossetta WU’s are Mini Rossetta, I have suspended Rossetta crunching until this problem could be resolved. Here is to note that in my other older machines running earlier versions of Boinc these error does not happen.

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Message boards : Number crunching : Minirosetta v1.34 bug thread



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