several error to report:
https://boinc.bakerlab.org/rosetta/result.php?resultid=110371301
stderr out

<core_client_version>5.10.20</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 7200
# random seed: 3975811
==
</stderr_txt>
<message>
<file_xfer_error>
<file_name>sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_4190_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid

-------------

https://boinc.bakerlab.org/rosetta/result.php?resultid=110418515
stderr out

<core_client_version>5.10.20</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 7200
# random seed: 3948666
======================================================
DONE :: 1 starting structures 8134.02 cpu seconds
This process generated 5 decoys from 5 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_31335_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid

-------------


https://boinc.bakerlab.org/rosetta/result.php?resultid=110838918
stderr out

<core_client_version>5.10.20</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 7200
# random seed: 1657484
==
</stderr_txt>
]]>

Validate state Invalid

---

According to this post I kill every 'sen15_RESAMPLE_BOINC_MFR_ABRELAX_...' WU.

cu,
Michael

---

1bq9A_SEARCH_PAIRINGS_ROUND3_RESCORE_75_SAVE_ALL_OUT_-1bq9A-_BARCODE__2166_3994_0
Crashed after I opened the graphics window about 1 hour and 11 minutes in as it was initializing the second model

result

Hi all: We're trying to track down several sources of error. Workuntis with the batch number 2155:

sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED


appear to be flawed. I've cancelled the job; you should also feel free to abort these jobs if you see them. There aren't that many. I just fixed the problem and sent out a similar job with ID 2163.

thanks *very* much for posting!

HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_2121_65537_0

Exit status = -1073741819 (0xc0000005)


Edit: Only a couple more edits and this might make sense :)

I believe there is a problem with 2168 wus. They are pruducing to many decoys.
2168

---

Jmarks

A valid WU, but still with errors:

<core_client_version>5.10.8</core_client_version>
<![CDATA[
<stderr_txt>
Graphics are disabled due to configuration...
# cpu_run_time_pref: 14400
# random seed: 3647667
SIGSEGV: segmentation violation
Stack trace (12 frames):
[0x8d7cf2f]
[0x8d77d1c]
[0xffffe500]
[0x8e024c7]
[0x8dd2715]
[0x8dd2481]
[0x83f9b8b]
[0x8de873f]
[0x8d79987]
[0x8d7afa5]
[0x8d73f9d]
[0x8e1487a]

Exiting...
Graphics are disabled due to configuration...
# cpu_run_time_pref: 14400
ERROR:: Exit from: fragments.cc line: 465
FILE_LOCK::unlock(): close failed.: Bad file descriptor
*** glibc detected *** double free or corruption (fasttop): 0x0909e348 ***
Graphics are disabled due to configuration...
# cpu_run_time_pref: 14400
*** glibc detected *** corrupted double-linked list: 0x09757f20 ***
Graphics are disabled due to configuration...
# cpu_run_time_pref: 14400
*** glibc detected *** corrupted double-linked list: 0x09511408 ***
Graphics are disabled due to configuration...
# cpu_run_time_pref: 14400
======================================================
DONE :: 1 starting structures 14211.6 cpu seconds
This process generated 19 decoys from 19 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
]]>

I really wonder about all these SIGSEGV errors. I don't think they are hardware related.
"glibc detected *** corrupted double-linked list" should be caused from the app itself.
System: AMD 64 X2 4400, 2Gig, standard clock, 64-Bit OpenSUSE 10.2, glibc-2.5-25.

cu,
Michael

---

I believe there is a problem with 2168 wus. They are pruducing to many decoys.
2168

To the project people, please also look at thread 4000 credit wus? which discusses this issue, the following is one of those posts from Xaak (in the quotes) and what I found when I looked at that host.

Found another one:
https://boinc.bakerlab.org/rosetta/results.php?hostid=567404&offset=20

Maybe the credit/decoy ratio on these are way off?

I don't believe the owner knows anything about this as all the WU's making the huge claims all have the same name, they all start with mcr1, for example

mcr1__BOINC_SYMM_FOLD_AND_DOCK_RELAX-mcr1_-short_mfr__2168_67176_0

On the other side of the coin the same computer is getting a lot of stuck WU's that are being terminated by the Watchdog that start with

STM0082_BOINC_MFR_ABRELAX_PICKED_

and they get just 20 credits for each of these WU's.

---

[quote]I believe there is a problem with 2168 wus. They are pruducing to many decoys.
2168

To the project people, please also look at thread 4000 credit wus? which discusses this issue, the following is one of those posts from Xaak (in the quotes) and what I found when I looked at that host.

That is the same thread my 2168 points to.

---

Jmarks

The machines affected by this "multi-decoy" bug seem all to be Core2Quads. And, contrary to what the 4000 credit WU thread implies, also other WU types than mcr1
are affected, see these two:

https://boinc.bakerlab.org/rosetta/result.php?resultid=111755669

https://boinc.bakerlab.org/rosetta/result.php?resultid=111753474

---

"I know that you believe you understand what you think I said, but I'm not sure you realize that what you heard is not what I meant." R.M. Nixon

Result ID 111953379
Name HR19__BOINC_LONGNOE_JUMPRELAX_BARCODE_SAVE_ALL_OUT_200-HR19_-_2121_55153_0
Workunit 101758314
Created 11 Oct 2007 16:10:04 UTC
Sent 11 Oct 2007 16:12:47 UTC
Received 14 Oct 2007 2:04:59 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status -1073741819 (0xc0000005)
Computer ID 510574
Report deadline 21 Oct 2007 16:12:47 UTC
CPU time 9247.8125
stderr out <core_client_version>5.10.20</core_client_version>
<![CDATA[
<message>
- exit code -1073741819 (0xc0000005)
</message>
<stderr_txt>
# cpu_run_time_pref: 21600
# random seed: 1886848


Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x00B77A52 write attempt to address 0x1FF63C2C

Engaging BOINC Windows Runtime Debugger...



********************

---

Here's one that didn't work out:

Result ID 112315759
Name STM0082_BOINC_MFR_ABRELAX_PICKED_2175_1860_0
Workunit 102095676
Created 13 Oct 2007 5:23:55 UTC
Sent 13 Oct 2007 5:25:15 UTC
Received 14 Oct 2007 18:15:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x0)
Computer ID 307276
Report deadline 23 Oct 2007 5:25:15 UTC
CPU time 3577.953125
stderr out

<core_client_version>5.10.20</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 10800
# random seed: 3485771
**********************************************************************
Rosetta score is stuck or going too long. Watchdog is ending the run!
Stuck at score 0 for 900 seconds
**********************************************************************
GZIP SILENT FILE: .aaSTM1.out

</stderr_txt>
]]>

Validate state Valid
Claimed credit 9.24557159531191
Granted credit 20
application version 5.80

---

Result ID 110380482
Name sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0
Workunit 100312279

client error and compute error

CPU time 21566.46875
stderr out

<core_client_version>5.10.20</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 21600
# random seed: 3967126
======================================================
DONE :: 1 starting structures 21565.9 cpu seconds
This process generated 10 decoys from 10 attempts
======================================================
=================================================================================

from BOINC Manager time is CET (gmt+2)

10/13/2007 1:57:01 AM|rosetta@home|Computation for task sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0 finished
10/13/2007 1:57:01 AM|rosetta@home|Output file sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0_0 for task sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0 absent
10/13/2007 1:57:01 AM|rosetta@home|Starting CNTRL_01ABRELAX_SAVE_ALL_OUT_-1di2_-_filters_1782_408715_0
10/13/2007 1:57:01 AM|rosetta@home|Starting task CNTRL_01ABRELAX_SAVE_ALL_OUT_-1di2_-_filters_1782_408715_0 using rosetta version 569
10/13/2007 1:57:02 AM|rosetta@home|Deferring communication for 1 min 0 sec
10/13/2007 1:57:02 AM|rosetta@home|Reason: Unrecoverable error for result sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0 (<file_xfer_error> <file_name>sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0_0</file_name> <error_code>-161</error_code></file_xfer_error>)



BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

---

Result ID 110380482
Name sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0
Workunit 100312279

You don't read the forum very much do you? (just joking)

Might I point you to this post in this very same thread?

https://boinc.bakerlab.org/rosetta/forum_thread.php?id=3552&nowrap=true#47621

For some reason this strikes me as very funny.

---

Proudly Banned from Predictator@Home and now Cosmology@home as well. Added SETI to the list today. Temporary ban only - so need to work harder :)



"You can't fix stupid" (Ron White)

doh! it got lost in the clutter of the rest of my work. I don't look at my work unit list that much so let that one slip through. thanks for the reminder.
have to go hunt for the rest if any.

Result ID 110380482
Name sen15_RESAMPLE_BOINC_MFR_ABRELAX_PICKED_2155_12875_0
Workunit 100312279

You don't read the forum very much do you? (just joking)

Might I point you to this post in this very same thread?

https://boinc.bakerlab.org/rosetta/forum_thread.php?id=3552&nowrap=true#47621

---

Version 5.80 BETA

computation error

unknown software exception 0xc0000409 occurred in the application at 0x00c2ec4a
lc26__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1c26_-foldanddock__2176_16844

using a lot of system cpu time.

the scaling for this work unit is way off in the graphs
mcr1__BOINC_SYMM_FOLD_AND_DOCK_RELAX-mcr1_-mfr__2128_72362_0

-275 accepted energy and lower is going down out of the window. the rmsd is often out the left of its window. I can't get any screenshots of this for some reason, but you guys know what i mean.

---

I have 5.10.20 boinc and I have just used Rosetta since last week.

It said computation error, I haven't got a log to report, I hibernate my laptop a lot, maybe this is the cause?

---

I have 5.10.20 boinc and I have just used Rosetta since last week.

It said computation error, I haven't got a log to report, I hibernate my laptop a lot, maybe this is the cause?

2007-10-17 13:13:01 [rosetta@home] Deferring communication for 1 min 11 sec
2007-10-17 13:13:01 [rosetta@home] Reason: Unrecoverable error for result 1opd__SEARCH_PAIRINGS_ROUND3_RESCORE_75_SAVE_ALL_OUT_-1opd_-_BARCODE__2166_6199_0 (Incorrect function. (0x1) - exit code 1 (0x1))

---

I have 5.10.20 boinc and I have just used Rosetta since last week.

It said computation error, I haven't got a log to report, I hibernate my laptop a lot, maybe this is the cause?

2007-10-17 13:13:01 [rosetta@home] Deferring communication for 1 min 11 sec
2007-10-17 13:13:01 [rosetta@home] Reason: Unrecoverable error for result 1opd__SEARCH_PAIRINGS_ROUND3_RESCORE_75_SAVE_ALL_OUT_-1opd_-_BARCODE__2166_6199_0 (Incorrect function. (0x1) - exit code 1 (0x1))

In general Preferenced make sure the-
Leave applications in memory while suspended?
(suspended applications will consume swap space if 'yes') yes

---

Jmarks