Message boards : Number crunching : Report Problems with Rosetta Version 5.16 I
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David Baker Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 17 Sep 05 Posts: 705 Credit: 559,847 RAC: 0 |
Wow: 5/24/2006 9:49:03 PM Aborting result JUMP_ALLBARCODE_t285__SAVE_ALL_OUT_530_16143_0: exceeded disk limit: 120577226.000000 > 100000000.000000 it was a write statement for in house diagnostics that Rhiju removed from teh code today and the updated version (with some other improvements) is currently being tested on ralph. we will send out the updated version after the ralph results are back (we are trying to be as cautious as possible!) in the next day or two. |
Alain Maes Send message Joined: 23 Nov 05 Posts: 3 Credit: 4,079,510 RAC: 4,339 ![]() |
Workunit https://boinc.bakerlab.org/rosetta/workunit.php?wuid=18060667 got stuck at 1.041% after 08:55 minutes,blocking BOINC 5.4.9 for almost an hour. Good that I catched it early. Workunit aborted. First time ever I had to do this for Rosetta. Kind regards Alain Kind regards Alain ![]() ![]() |
![]() Send message Joined: 25 Sep 05 Posts: 168 Credit: 247,828 RAC: 0 |
Workunit https://boinc.bakerlab.org/rosetta/workunit.php?wuid=18060667 got stuck at 1.041% after 08:55 minutes,blocking BOINC 5.4.9 for almost an hour. Good that I catched it early. Workunit aborted. First time ever I had to do this for Rosetta. Some workunits take a long time (over an hour) to reach their first structure, and this is normal behavior. They stay at 1.041% the whole time, until they reach their first structure. So this work unit you aborted was likely OK. There is a "watchdog" in the code that deletes work units that are truly stuck for a long time. I generally wait at least 4-5 hours before I start to get concerned. Regards, Bob P. |
![]() ![]() Send message Joined: 30 Dec 05 Posts: 1755 Credit: 4,690,520 RAC: 0 |
...stuck at 1.041% after 08:55 minutes,blocking BOINC 5.4.9 for almost an hour. Can you explain what you mean by that? Do you mean that the WU was in a "running" status for an hour, but only shows 8:55min. of CPU time? Add this signature to your EMail: Running Microsoft's "System Idle Process" will never help cure cancer, AIDS nor Alzheimer's. But running Rosetta@home just might! https://boinc.bakerlab.org/rosetta/ |
![]() ![]() Send message Joined: 25 Mar 06 Posts: 71 Credit: 1,630,458 RAC: 0 |
Errored out. Max. disk useage exceeded. JUMP_RELAX_ALLBARCODE_t285__SAVE_ALL_OUT_530_1618_0 http://www.boinc.bakerlab.org/rosetta/result.php?resultid=21291895 |
Mike Gelvin![]() Send message Joined: 7 Oct 05 Posts: 65 Credit: 10,612,039 RAC: 0 |
Errored out. Max. disk useage exceeded. Can anyone identify the units that will cause this problem so I may delete them from my queue? ![]() |
![]() ![]() Send message Joined: 30 Dec 05 Posts: 1755 Credit: 4,690,520 RAC: 0 |
Failure: 5/25/2006 8:42:49 PM|rosetta@home|Aborting task JUMP_ALLBARCODE_t285__SAVE_ALL_OUT_530_8465_0: exceeded disk limit: 139256061.000000 > 100000000.000000 5/25/2006 8:42:49 PM|rosetta@home|Unrecoverable error for result JUMP_ALLBARCODE_t285__SAVE_ALL_OUT_530_8465_0 (Maximum disk usage exceeded) I crunch a 24hr time preference. Looks like it got about 15hrs in to it. Seeing a trend here? Add this signature to your EMail: Running Microsoft's "System Idle Process" will never help cure cancer, AIDS nor Alzheimer's. But running Rosetta@home just might! https://boinc.bakerlab.org/rosetta/ |
Mike Gelvin![]() Send message Joined: 7 Oct 05 Posts: 65 Credit: 10,612,039 RAC: 0 |
Wow: 5/24/2006 9:49:03 PM Aborting result JUMP_ALLBARCODE_t285__SAVE_ALL_OUT_530_16143_0: exceeded disk limit: 120577226.000000 > 100000000.000000 If this is true, I don't understand why 5.16 is still being run on Ralph. ![]() |
![]() Send message Joined: 25 Sep 05 Posts: 168 Credit: 247,828 RAC: 0 |
[quote][quote]Wow: 5/24/2006 9:49:03 PM Aborting result JUMP_ALLBARCODE_t285__SAVE_ALL_OUT_530_16143_0: exceeded disk limit: 120577226.000000 > 100000000.000000 I read this as the code being included within the workunit itself (the JUMP_ALLBARCODE_t285__SAVE_ALL_OUT), and not within the 5.16 application, but maybe I misread this. Regards, Bob P. |
![]() ![]() Send message Joined: 30 Dec 05 Posts: 1755 Credit: 4,690,520 RAC: 0 |
MAPRELAX_TEST_hom003_1fna__511_7114_0 using rosetta version 5.16 Shows VM size as 1,332,400K and steadily growing after 11.5hrs of crunching. Windows had to extend VM, and PC is getting sluggish. Windows XP Pro SP 1, BOINC 5.4.9 ...and attempting to display the graphic just brings up a totally black screen. No text, no boxes, no proteins. Add this signature to your EMail: Running Microsoft's "System Idle Process" will never help cure cancer, AIDS nor Alzheimer's. But running Rosetta@home just might! https://boinc.bakerlab.org/rosetta/ |
Astro![]() Send message Joined: 2 Oct 05 Posts: 987 Credit: 500,253 RAC: 0 |
After experiencing many MANY fatal windows errors in Ralph with both 5.12 and 5.16 WUs I turned off the screensaver and all results after that worked fine. I turned the Screensaver back on and wuid=18092117 failed tonite. Screensaver background, windows error box on top of that. Tony Result ID 21609303 Name FRA_t289_hom001_3_LOOPRLX_IGNORE_THE_REST_dect289_3_t289_3_03_4.pdb_541_65_0 Workunit 18092117 Created 26 May 2006 6:29:12 UTC Sent 26 May 2006 8:27:04 UTC Received 27 May 2006 3:13:28 UTC Server state Over Outcome Client error Client state Computing Exit status -1073741811 (0xc000000d) Computer ID 212252 Report deadline 2 Jun 2006 8:27:04 UTC CPU time 12781.171875 stderr out <core_client_version>5.4.9</core_client_version> <message> - exit code -1073741811 (0xc000000d) </message> <stderr_txt> # random seed: 3043036 # cpu_run_time_pref: 28800 </stderr_txt> Validate state Invalid Claimed credit 50.6089010366131 Granted credit 0 application version 5.16 |
Alain Maes Send message Joined: 23 Nov 05 Posts: 3 Credit: 4,079,510 RAC: 4,339 ![]() |
...stuck at 1.041% after 08:55 minutes,blocking BOINC 5.4.9 for almost an hour. Indeed, 8:55 min CPU time, running but no further progress. Kind regards Alain ![]() ![]() |
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Number crunching :
Report Problems with Rosetta Version 5.16 I
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