Message boards : Number crunching : Graphics do not work with linux version of rosetta beta.
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kotenok2000 Send message Joined: 22 Feb 11 Posts: 255 Credit: 458,679 RAC: 308 ![]() |
Graphics do not work with linux version of rosetta beta. When i start graphical app it immediately closes and outputs this in stderrgfx.txt: cat /var/lib/boinc/slots/6/stderrgfx.txt ERROR: Unable to open file: /var/lib/boinc/projects/boinc.bakerlab.org_rosetta/../database/chemical/residue_type_sets/fa_standard/residue_types.txt ERROR:: Exit from: src/core/chemical/GlobalResidueTypeSet.cc line: 145 23:25:39 (68987): called boinc_finish(0) It should look for database at /var/lib/boinc/projects/boinc.bakerlab.org_rosetta/database_0f7f01a1b07/database , not /var/lib/boinc/projects/database |
kotenok2000 Send message Joined: 22 Feb 11 Posts: 255 Credit: 458,679 RAC: 308 ![]() |
It works if i run graphical app manually with manually specified database path user@ubuntutheoryvm:/var/lib/boinc/slots/6$ ../../projects/boinc.bakerlab.org_rosetta/rosetta_graphics_6.05_x86_64-pc-linux-gnu -database /var/lib/boinc/projects/boinc.bakerlab.org_rosetta/database_0f7f01a1b07/database/ Starting graphics.. core.init: Checking for fconfig files in pwd and ./rosetta/flags core.init: Rosetta version: 2023.36.post.dev+5.master.76e2f63f750 76e2f63f750b32d50338385a5e1d99ecb36da226 git@github.com:RosettaCommons/main.git 2023-09-11T11:01:30 core.init: command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_graphics_6.05_x86_64-pc-linux-gnu -database /var/lib/boinc/projects/boinc.bakerlab.org_rosetta/database_0f7f01a1b07/database/ basic.random.init_random_generator: 'RNG device' seed mode, using '/dev/urandom', seed=935815675 seed_offset=0 real_seed=935815675 basic.random.init_random_generator: RandomGenerator:init: Normal mode, seed=935815675 RG_type=mt19937 Opened semaphore Attached shared memory segment core.chemical.GlobalResidueTypeSet: Finished initializing fa_standard residue type set. Created 985 residue types core.chemical.GlobalResidueTypeSet: Total time to initialize 0.971783 seconds. |
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Number crunching :
Graphics do not work with linux version of rosetta beta.
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