Multiattach mode disk images

Message boards : Number crunching : Multiattach mode disk images

To post messages, you must log in.

Previous · 1 · 2 · 3

AuthorMessage
Jim1348

Send message
Joined: 19 Jan 06
Posts: 881
Credit: 52,257,545
RAC: 0
Message 106777 - Posted: 12 Aug 2022, 15:43:13 UTC - in response to Message 106776.  

Very good. I will try it later. I have solved it a different way now.
I have put the machine on Folding.

But Rosetta will be worth a try again on another machine when I can start up a Ryzen 3900X in a couple of months.
You effort is quite remarkable.
ID: 106777 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Jim1348

Send message
Joined: 19 Jan 06
Posts: 881
Credit: 52,257,545
RAC: 0
Message 106778 - Posted: 12 Aug 2022, 18:42:33 UTC - in response to Message 106776.  
Last modified: 12 Aug 2022, 18:49:56 UTC

VERR_ALREADY_EXISTS tells you there's a disk registered with this name/UUID

Try
vboxmanage list hdds

But to answer the question, here is what it shows:

UUID: ef35dff9-d482-48f8-9519-fef6c1b23a3b
Parent UUID: base
State: inaccessible
Type: normal (base)
Location: /var/lib/boinc-client/projects/boinc.bakerlab.org_rosetta/AIMNet_vm_v2.vdi.bak
Storage format: VDI
Capacity: 0 MBytes
Encryption: disabled

UUID: f93b7440-2207-4969-bc1f-bbd87433063a
Parent UUID: base
State: inaccessible
Type: normal (base)
Location: /var/lib/boinc-client/projects/boinc.bakerlab.org_rosetta/AIMNet_vm_v2.vdi
Storage format: VDI
Capacity: 0 MBytes
Encryption: disabled


I will deal with it later.

EDIT: I closed them both, in preparation for a new try later, though this machine is really better on Folding anyway, and I will probably use the 3900X.

Thanks loads.
ID: 106778 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
kotenok2000
Avatar

Send message
Joined: 22 Feb 11
Posts: 259
Credit: 485,359
RAC: 238
Message 106780 - Posted: 13 Aug 2022, 10:01:49 UTC - in response to Message 106778.  

Will <open_name>vm_image.vdi</open_name> break something or does it just take hard drive space?
ID: 106780 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
computezrmle

Send message
Joined: 9 Dec 11
Posts: 63
Credit: 9,680,103
RAC: 0
Message 106781 - Posted: 13 Aug 2022, 11:27:23 UTC - in response to Message 106780.  

A "file" must be there (in the slots directory).
Beside that, in this special case the "file" has not other function any more.


With "<open_name>vm_image.vdi</open_name>" the file is a "softlink" called vm_image.vdi and pointing back to AIMNet_vm_v2.vdi in the project directory.
BOINC doesn't care but it may confuse users looking through the slots directories.

Without "<open_name>vm_image.vdi</open_name>" the softlink file will be called AIMNet_vm_v2.vdi.


In both cases the softlink file's size is just a few bytes.
ID: 106781 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 106784 - Posted: 16 Aug 2022, 14:34:17 UTC

Still download error: Rosetta@home | [error] Application file AIMNet_vm_v2.vdi missing signature

I did:
- Extracted AIMNet_vm_v2.vdi from AIMNet_vm_v2.vdi.gz
- Renamed "AIMNet_vm_v2.vdi" to "AIMNet_vm_v2.vdi.bak"
- Ran "vboxmanage clonemedium AIMNet_vm_v2.vdi.bak AIMNet_vm_v2.vdi" (Important: this creates a new UUID for AIMNet_vm_v2.vdi)
- Disabled the client's network access
- Resetted the Rosetta project (this removes the app_version you got from the project; must be done to avoid getting mixed versions)
- Shutdowned the client
- Created app_info.xml
- Modified vbox_job_v4.xml
- Copied the files: vboxwrapper_26205_windows_x86_64.exe
AIMNet_vm_v2.vdi (the already cloned one)
app_info.xml
vbox_job_v4.xml (the already modified one)
boinc_app_v4
- Restarted Boinc Client
- Enabled client's netword access

What am I doing wrong?
ID: 106784 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
computezrmle

Send message
Joined: 9 Dec 11
Posts: 63
Credit: 9,680,103
RAC: 0
Message 106785 - Posted: 16 Aug 2022, 15:25:57 UTC - in response to Message 106784.  

Post the app_info.xml.
Is it located in the Rosetta projects dir?
Does your BOINC client log mention an app_info (or anonymous platform) is loaded?

Are there any <file> or <file_signature> tags in the Rosetta section of client_state.xml before you restart the BOINC client?
ID: 106785 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 106786 - Posted: 16 Aug 2022, 17:02:59 UTC - in response to Message 106785.  

Post the app_info.xml.

For sure!
<app_info>
    <app>
        <name>rosetta_python_projects</name>
        <user_friendly_name>rosetta python projects</user_friendly_name>
        <non_cpu_intensive>0</non_cpu_intensive>
    </app>
    <file_info>
        <name>vboxwrapper_26205_windows_x86_64.exe</name>
        <executable/>
    </file_info>
    <file_info>
        <name>boinc_app_v4</name>
        <executable/>
    </file_info>
    <file_info>
        <name>vbox_job_v4.xml</name>
    </file_info>
    <file_info>
        <name>AIMNet_vm_v2.vdi</name>
    </file_info>
    <app_version>
        <app_name>rosetta_python_projects</app_name>
        <version_num>103</version_num>
        <avg_ncpus>1.000000</avg_ncpus>
        <plan_class>vbox64</plan_class>
        <api_version>7.7.0</api_version>
        <file_ref>
            <file_name>vboxwrapper_26205_windows_x86_64.exe</file_name>
            <main_program/>
        </file_ref>
        <file_ref>
            <file_name>boinc_app_v4</file_name>
            <open_name>shared/boinc_app</open_name>
            <copy_file/>
        </file_ref>
        <file_ref>
            <file_name>vbox_job_v4.xml</file_name>
            <open_name>vbox_job.xml</open_name>
        </file_ref>
        <file_ref>
            <file_name>AIMNet_vm_v2.vdi</file_name>
        </file_ref>
        <dont_throttle/>
    </app_version>
</app_info>


Is it located in the Rosetta projects dir?

Yes

Does your BOINC client log mention an app_info (or anonymous platform) is loaded?

Yes

Are there any <file> or <file_signature> tags in the Rosetta section of client_state.xml before you restart the BOINC client?

This is the part of <file_signature> tags now, after the restart.
I haven't looked before.
<scheduler_url>https://bwsrv1.bakerlab.org/rosetta_cgi/cgi</scheduler_url>
    <code_sign_key>
1024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.
</code_sign_key>

ID: 106786 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
computezrmle

Send message
Joined: 9 Dec 11
Posts: 63
Credit: 9,680,103
RAC: 0
Message 106793 - Posted: 17 Aug 2022, 8:44:43 UTC - in response to Message 106786.  

Looks fine.

You may add this option in cc_config.xml and try it again:
<dont_check_file_sizes>1</dont_check_file_sizes>
ID: 106793 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 106795 - Posted: 17 Aug 2022, 18:18:48 UTC - in response to Message 106793.  

You may add this option in cc_config.xml and try it again:
<dont_check_file_sizes>1</dont_check_file_sizes>


I have no cc_config.xml.
Have i to create it?
ID: 106795 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
computezrmle

Send message
Joined: 9 Dec 11
Posts: 63
Credit: 9,680,103
RAC: 0
Message 106796 - Posted: 17 Aug 2022, 18:47:19 UTC - in response to Message 106795.  
Last modified: 17 Aug 2022, 18:48:57 UTC

I just checked the RPC replies.
Looks like the project sends the vdi info with each WU.
This means that you need a modified (development) client to get this working.

<edit>
... or a project that behaves more friendly, like LHC.
</edit>
ID: 106796 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Jim1348

Send message
Joined: 19 Jan 06
Posts: 881
Credit: 52,257,545
RAC: 0
Message 106797 - Posted: 17 Aug 2022, 20:50:26 UTC - in response to Message 106796.  

<edit>
... or a project that behaves more friendly, like LHC.
</edit>

That is my conclusion too. I am trying to get the new CMS on the .dev site.
(I know, a bit off topic, but nobody knows what the real topic is here anymore).
ID: 106797 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
.clair.

Send message
Joined: 2 Jan 07
Posts: 274
Credit: 26,399,595
RAC: 0
Message 106798 - Posted: 18 Aug 2022, 0:00:16 UTC - in response to Message 106797.  

<edit>
... or a project that behaves more friendly, like LHC.
</edit>

That is my conclusion too. I am trying to get the new CMS on the .dev site.
(I know, a bit off topic, but nobody knows what the real topic is here anymore).

Here in the UK , topic used to be a chocolate bar with hazelnuts in it :-)
ID: 106798 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 107655 - Posted: 4 Nov 2022, 9:27:27 UTC
Last modified: 4 Nov 2022, 9:29:43 UTC

Today Boinc developers released a new official version of boinc wrapper.
But i don't know if Rosetta team will be interested
ID: 107655 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
computezrmle

Send message
Joined: 9 Dec 11
Posts: 63
Credit: 9,680,103
RAC: 0
Message 107680 - Posted: 6 Nov 2022, 9:50:05 UTC - in response to Message 107655.  

Right.
:-)

It's now up to the Rosetta developers to make use of the multiattach feature.
Just in case they don't know where to download the required vboxwrapper.

Apple:
https://boinc.berkeley.edu/dl/vboxwrapper_26206_x86_64-apple-darwin.zip

Linux:
https://boinc.berkeley.edu/dl/vboxwrapper_26206_x86_64-pc-linux-gnu

Windows:
https://boinc.berkeley.edu/dl/vboxwrapper_26206_windows_x86_64.exe.zip
ID: 107680 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 107941 - Posted: 10 Jan 2023, 16:49:38 UTC - in response to Message 107680.  

Hoping that 2023 brings these updates
ID: 107941 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 108183 - Posted: 17 Mar 2023, 7:45:14 UTC - in response to Message 107941.  

Very interesting talk of computezmle about vbxwrapper at Boinc Workshop
ID: 108183 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 108771 - Posted: 17 Dec 2023, 10:15:51 UTC - in response to Message 108183.  

Some virtualbox wus on Ralph.
I crunched only 1 so i don't know if they implemented the multi-attach funtionality....
ID: 108771 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 108773 - Posted: 20 Dec 2023, 9:52:23 UTC - in response to Message 108771.  
Last modified: 20 Dec 2023, 9:52:43 UTC

I crunched only 1 so i don't know if they implemented the multi-attach funtionality....


Today, 5 wus, over 76Gb of disk space used, so no multi-attach disk.
Please, please, use this funcionality!!
ID: 108773 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 1 Dec 05
Posts: 1994
Credit: 9,567,403
RAC: 6,975
Message 108791 - Posted: 19 Jan 2024, 8:23:37 UTC - in response to Message 105000.  

I also suggest to switch the VM's virtual disk adapter to sata/IntelAHCI (via vbox_job.xml) and to get rid of forcing a VM snapshot every 10 min.
See:
https://boinc.berkeley.edu/trac/wiki/VboxApps


From what i know, the wiki pages are no more updated/manteined
See this for update situation of vbox wrapper
ID: 108791 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Previous · 1 · 2 · 3

Message boards : Number crunching : Multiattach mode disk images



©2024 University of Washington
https://www.bakerlab.org