RoseTTAFold and homo-trimers


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rmarabini

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Message 102895 - Posted: 7 Oct 2021, 7:50:29 UTC

Hi,

I would like to apply RoseTTAFold to a protein which is composed of three identical units of polypeptide
(a homo-trimer). Do I need to generate paired alignments between the three chains? Does anybody have an script
able to do this task?

thanks.
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Falconet

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Message 102899 - Posted: 7 Oct 2021, 12:54:25 UTC - in response to Message 102895.  

Hi,

You should contact the Baker Lab directly because no one responsible for Rosetta@home or Rosetta reads these forums.
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rmarabini

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Message 102900 - Posted: 7 Oct 2021, 13:03:47 UTC - in response to Message 102899.  

Thanks for the tip
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Message boards : Rosetta@home Science : RoseTTAFold and homo-trimers



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