Message boards : Number crunching : Large proteins
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[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,623,704 RAC: 8,387 |
Have the larger ones started coming out? This beast ran for 18 hours and only had one decoy: https://boinc.bakerlab.org/rosetta/result.php?resultid=1156094562 Same here for me, 1 decoy in 14hs |
[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,623,704 RAC: 8,387 |
I consider it mandatory that in order to distribute such tasks there needs to be a new, separate RAM threshold setting in the project's preference section that requires manual activiation before such tasks are going to be send to the corresponding machines. It's 2 days that i'm asking to create a possibility to choose... |
Charles Dennett Send message Joined: 27 Sep 05 Posts: 102 Credit: 2,081,660 RAC: 421 |
Have the larger ones started coming out? This beast ran for 18 hours and only had one decoy: https://boinc.bakerlab.org/rosetta/result.php?resultid=1156094562 I believe both of those were ended by the watchdog after going 10 hours (36000 seconds) over your selected run times: BOINC:: CPU time: 65043.4s, 36000s + 28800s[2020- 4-21 8:57: 3:] :: BOINC Output exists: default.out.gz Size: WARNING! cannot get file size for default.out.gz: could not open file. -1 BOINC:: CPU time: 50670.5s, 36000s + 14400s[2020- 4-21 10:22:32:] :: BOINC WARNING! cannot get file size for default.out.gz: could not open file. Output exists: default.out.gz Size: -1 -Charlie -Charlie |
rsNeutrino Send message Joined: 22 Mar 20 Posts: 10 Credit: 4,965,399 RAC: 6,282 |
Here I have two tasks that run just shy of the watchdog timeout of 18 hours, without the BOINC:: CPU time message: https://boinc.bakerlab.org/rosetta/result.php?resultid=1156071420 https://boinc.bakerlab.org/rosetta/result.php?resultid=1156071425 I think that is too close for comfort. When systems are a little bit slower, all that work might still be wasted because of a too short timeout if it fails to generate some useful output... |
Message boards :
Number crunching :
Large proteins
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