Rosetta 4.1+ and 4.2+
Message boards : Number crunching : Rosetta 4.1+ and 4.2+
Previous · 1 . . . 24 · 25 · 26 · 27 · 28 · 29 · 30 . . . 34 · Next
| Author | Message |
|---|---|
 Grant (SSSF)Send message Joined: 28 Mar 20 Posts: 1725 Credit: 18,399,563 RAC: 19,775 
|
Edit- just found one running on one of my systems.OK, i've let that Task run overnight & 10 hours later it's still going. 54.8% done, another 8 hours to go. It was using 5GB of RAM when i first checked this morning, it's now down to 4.88MB. It still hasn't made any checkpoints since the first one, a bit over 7 minutes after starting. Edit- Even though it only shows 4.88MB of RAM being used, system RAM usage is still way, way above it's usual level. With a Task using so little RAM, it should be below it's usual level. Edit- This could be interesting. another _fold_and_dock_ Task has just started on the same system, and it's RAM usage is increasing at 100MB/s. 15GB and still climbing. It just hit 31GB, then dropped back down to 20GB, and climbing again at 100MB/s. Page file in use- 111GB. Grant Darwin NT |
|
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1725 Credit: 18,399,563 RAC: 19,775
|
Here's one of these out of control RAM Tasks that tried to run on a Windows system with only 2GB of RAM. It managed to last for 25min before going down in a screaming heap. kp8RjDVk_fold_and_dock_SAVE_ALL_OUT_1009390_687_0 <core_client_version>7.6.33</core_client_version>
< Send message Joined: 29 Mar 20 Posts: 97 Credit: 332,619 RAC: 25 |
I don't know. It could be some corner case happening. I regularly find those when I test things for developers. Einstein has a setting in Project preferences for setting a LIBC215 flag for getting the correct applications. But probably just some iffy setting in my environment that Rosetta does not like. Or some weakness in the hardware that only Rosetta uncovers. |
Mr P Hucker Send message Joined: 12 Aug 06 Posts: 1600 Credit: 12,116,986 RAC: 9,863 
|
I don't know. It could be some corner case happening. I regularly find those when I test things for developers. Einstein has a setting in Project preferences for setting a LIBC215 flag for getting the correct applications. I just found a quirk in my Dell R410 dual Xeon system. It crashes after about 5 minutes if I try to run more than about 8-12 LHC Theory tasks at once, yet it's been fine for the 6 months I've owned it running all sorts of projects in different combinations. A Windows 10 BSOD appeared, so I downloaded a BSOD reader which listed a certain dll and offered a direct google search, which said "try a BIOS upgrade". So I did, and found I was on version 6, and the latest was 14. Works great now. The very similar R510 is fine though. It's actually quite amazing computers work at all given the vast array of different hardware things have to run on. 
|
|
Keith Myers Send message Joined: 29 Mar 20 Posts: 97 Credit: 332,619 RAC: 25 |
And I am guilty of not running the latest BIOS. Normally, unless there is some absolutely compelling reason to update to a new BIOS, I believe in "if it ain't broke, leave it alone" From the OCN forums, the latest BIOS only had marginal, if any improvements over the one I am on. And nowhere near consensus on just what the supposed improvements were. I don't push to the extremes that most of the forum members do, so just like to stay in the middle ground. |
|
Mr P Hucker Send message Joined: 12 Aug 06 Posts: 1600 Credit: 12,116,986 RAC: 9,863
|
And I am guilty of not running the latest BIOS. Normally, unless there is some absolutely compelling reason to update to a new BIOS, I believe in "if it ain't broke, leave it alone" From the OCN forums, the latest BIOS only had marginal, if any improvements over the one I am on. And nowhere near consensus on just what the supposed improvements were. I don't push to the extremes that most of the forum members do, so just like to stay in the middle ground. Agreed, I don't bother upgrading BIOSes normally (but I do like the latest drivers and Windows updates). Especially since they often end up screwing up my settings and stopping Windows booting (and on modern boards there's a lot of things that screw up bootability). On my main computer I only did it once since the fan speeds started acting up. A few months later, it forgot some fan settings and I discovered the CMOS battery was rather low. Unusual normally, but that board had been sat unplugged for a year. And now I notice that the battery caused it to downgrade its BIOS again?! I guess something corrupted with the low battery and it went to its backup one.
|
|
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1725 Credit: 18,399,563 RAC: 19,775
|
Edit- just found one running on one of my systems.OK, i've let that Task run overnight & 10 hours later it's still going. Well, it took just over 18 hours to complete, and it produced 1 Decoy. And it got less than half the Credit it should have (Same Credit as for doing 8 hours of work). Grant Darwin NT |
|
James W Send message Joined: 25 Nov 12 Posts: 130 Credit: 1,766,254 RAC: 0 |
Name: kp8RjDVk_fold_and_dock_SAVE_ALL_OUT_1009390_4466 Application: Rosetta v4.20 windows_x86_64 Device: 1759960 Task: 1255806099. WU: 1125665905 Status: Error while computing Exit status: -529697949 (0xE06D7363) Unknown error code Errors: Too many errors (may have bug). Too many total results. Peak working set size 5,967.66 MB Peak swap size 8,158.26 MB Peak disk usage 26.02 MB Stderr output: Unhandled Exception Detected...This was one of 3 errors today with my two hosts, working the above "fold and dock" series. This particular host has 8 GB RAM. It held out for 18+ minutes before the memory demand noted above overwhelmed it and it errored out the task. My host was the first to crunch and the wingperson with 16 GB RAM also errored for same reason. This is the same series of tasks which many here have commented on -- memory gobblers. |
|
Tomcat雄猫 Send message Joined: 20 Dec 14 Posts: 180 Credit: 5,386,173 RAC: 0 |
Weirdness going on with epcam_breaker_graft tasks and pdl1_graft tasks. Ryzen 5 3600. epcam_breaker_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_5qk5oi3n_1009505_1_0 epcam_breaker_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_6bm5er4p_1009415_1_0 <core_client_version>7.16.7</core_client_version> <![CDATA[ <stderr_txt> aftMover.cc:537 For this scaffold there are not suitable scaffold grafts within your constrains ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: ------------------------- End developer's backtrace -------------------------- AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS. [ ERROR ]: Caught exception: File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537 For this scaffold there are not suitable scaffold grafts within your constrains ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: ------------------------- End developer's backtrace -------------------------- AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS. Over and over... pdl1_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_0qr5ng7d_1009519_1_0 pdl1_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_3lp5qn2q_1009342_1_0 Same issue, just: <core_client_version>7.16.7</core_client_version> <![CDATA[ <stderr_txt> ftMover.cc:537 For this scaffold there are not suitable scaffold grafts within your constrains ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: ------------------------- End developer's backtrace -------------------------- AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS. [ ERROR ]: Caught exception: File: ......srcprotocolsmotif_graftingmoversMotifGraftMover.cc:537 For this scaffold there are not suitable scaffold grafts within your constrains ------------------------ Begin developer's backtrace ------------------------- BACKTRACE: ------------------------- End developer's backtrace -------------------------- AN INTERNAL ERROR HAS OCCURED. PLEASE SEE THE CONTENTS OF ROSETTA_CRASH.log FOR DETAILS. Over and over. Everything else runs absolutely fine. I don't know the location of the "ROSETTA_CRASH.log" mentioned. |
|
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1725 Credit: 18,399,563 RAC: 19,775
|
Over and over.It's to do with the setup of the Task. Normal Tasks might have one (or a few) starting structures & produce all the decoys from that one (or few) starting structures. These ones produce 1 Decoy from just 1 Starting Structure, and may produce hundreds of Decoys, hence hundreds of error messages. However they are still producing Valid results. I don't know the location of the "ROSETTA_CRASH.log" mentioned.Apparently It's in the Slots folder for that particular Task, but it's deleted once the Task is uploaded and the next Task using that slot starts. Just had a look and found one on one of my systems; it looks like it's just a more detailed output of what is in the stderr.txt file ##############################################################################################################And repeat over & over till the Task ends. Grant Darwin NT |
|
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1725 Credit: 18,399,563 RAC: 19,775
|
New Tasks, new errors. I'm wondering if the file name might be the cause- what's the limit on the number of characters? (Just did d search and for current file systems the path can be huge, but the file names tend to still be limited in many case- and even in those that can handle larger file names, the fact is many applications still have issues with more than 255 characters). These appear to be 270+ consensus_loop_091_c1_barrel6_3_c0851511e59b62c843e7e1f962b82db8.TrR_0_59_L_L1_TrR_FOLD_1_0_0.05_0078_547913472f14860137e866860f63eacb_41ANVQEE_fold_SAVE_ALL_OUT_1010364_48 <core_client_version>7.6.33</core_client_version> <![CDATA[ <stderr_txt> command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers.index -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers.index -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 5 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -beta 1 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip consensus_loop_091_c1_barrel6_3_c0851511e59b62c843e7e1f962b82db8.TrR_0_59_L_L1_TrR_FOLD_1_0_0.05_0078_547913472f14860137e866860f63eacb_41ANVQEE_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 3273632 Using database: database_357d5d93529_n_methylminirosetta_database WARNING! attempt to create gzipped file ../../projects/boinc.bakerlab.org_rosetta/consensus_loop_091_c1_barrel6_3_c0851511e59b62c843e7e1f962b82db8.TrR_0_59_L_L1_TrR_FOLD_1_0_0.05_0078_547913472f14860137e866860f63eacb_41ANVQEE_fold_SAVE_ALL_OUT_1010364_48_0_r1507729193_0 failed. ====================================================== DONE :: 1 starting structures 28626.6 cpu seconds This process generated 115 decoys from 115 attempts ====================================================== BOINC :: WS_max 4.46317e+08 05:28:12 (8024): called boinc_finish(0) </stderr_txt> <message> upload failure: <file_xfer_error> <file_name>consensus_loop_091_c1_barrel6_3_c0851511e59b62c843e7e1f962b82db8.TrR_0_59_L_L1_TrR_FOLD_1_0_0.05_0078_547913472f14860137e866860f63eacb_41ANVQEE_fold_SAVE_ALL_OUT_1010364_48_0_r1507729193_0</file_name> <error_code>-161 (not found)</error_code> </file_xfer_error> </message> ]]> consensus_loop_MonomerDesign2019_091_c1_barrel6_3_c0851511e59b62c843e7e1f96_L1_TrR_FOLD_1_0_0.05_0058_66c8df7d20fa4320bbbca94af3316f65_UEK5CU7X_fold_SAVE_ALL_OUT_1010364_38 <core_client_version>7.6.33</core_client_version> <![CDATA[ <stderr_txt> command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe -abinitio::fastrelax 1 -ex2aro 1 -frag3 00001.200.3mers.index -in:file:native 00001.pdb -silent_gz 1 -frag9 00001.200.9mers.index -out:file:silent default.out -ex1 1 -abinitio::rsd_wt_loop 0.5 -relax::default_repeats 5 -abinitio::use_filters false -abinitio::increase_cycles 10 -abinitio::rsd_wt_helix 0.5 -beta 1 -abinitio::rg_reweight 0.5 -in:file:boinc_wu_zip consensus_loop_MonomerDesign2019_091_c1_barrel6_3_c0851511e59b62c843e7e1f96_L1_TrR_FOLD_1_0_0.05_0058_66c8df7d20fa4320bbbca94af3316f65_UEK5CU7X_data.zip -out:file:silent default.out -silent_gz -mute all -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 3256042 Using database: database_357d5d93529_n_methylminirosetta_database WARNING! attempt to create gzipped file ../../projects/boinc.bakerlab.org_rosetta/consensus_loop_MonomerDesign2019_091_c1_barrel6_3_c0851511e59b62c843e7e1f96_L1_TrR_FOLD_1_0_0.05_0058_66c8df7d20fa4320bbbca94af3316f65_UEK5CU7X_fold_SAVE_ALL_OUT_1010364_38_0_r1985723836_0 failed. ====================================================== DONE :: 1 starting structures 28772.6 cpu seconds This process generated 107 decoys from 107 attempts ====================================================== BOINC :: WS_max 4.43654e+08 05:05:30 (9604): called boinc_finish(0) </stderr_txt> <message> upload failure: <file_xfer_error> <file_name>consensus_loop_MonomerDesign2019_091_c1_barrel6_3_c0851511e59b62c843e7e1f96_L1_TrR_FOLD_1_0_0.05_0058_66c8df7d20fa4320bbbca94af3316f65_UEK5CU7X_fold_SAVE_ALL_OUT_1010364_38_0_r1985723836_0</file_name> <error_code>-161 (not found)</error_code> </file_xfer_error> </message> ]]> Grant Darwin NT |
|
Mr P Hucker Send message Joined: 12 Aug 06 Posts: 1600 Credit: 12,116,986 RAC: 9,863
|
New Tasks, new errors. I'm sure Windows has a path limit of 255. I've come across it when trying to back stuff up to a nested set of folders. So it would certainly fall over with a file at 255.
|
|
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1725 Credit: 18,399,563 RAC: 19,775
|
Yeah, although after a re-count now that i'm more awake, as large as they are they're actually less than 200. And even with the rest of the path they'd still be less than 255.New Tasks, new errors.I'm sure Windows has a path limit of 255. I've come across it when trying to back stuff up to a nested set of folders. So it would certainly fall over with a file at 255. So whatever the issue is, it looks like it probably isn't the length of the file name that's causing it. Edit- decided to check my Valids, and there are are two of the same type (and huge file name) that Validated OK. *slaps self* Grant Darwin NT |
|
James W Send message Joined: 25 Nov 12 Posts: 130 Credit: 1,766,254 RAC: 0 |
Name: vegf_site1_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_3vc7wl1o_1013290_1 Application: Rosetta v4.20 windows_x86_64 Device: 3710630 Task: 1266413150. WU: 1134838287 Status: Completed and validated Peak working set size 1,234.59 MB Peak swap size 1,209.23 MB Stderr output: <stderr_txt>aftMover.cc:537And continues repeating above until apparently runs out of space. Just noting we have a new task type with these same errors/exceptions which still create valid results. FYI. Get these same results on both of my hosts. |
|
James W Send message Joined: 25 Nov 12 Posts: 130 Credit: 1,766,254 RAC: 0 |
Name: cd28_1yjd_graft_v1_SAVE_ALL_OUT_IGNORE_THE_REST_7xw0rf6z_1013410_1_0 Application: Rosetta v4.20 windows_x86_64 Device: 3710630 Task: 1267451815. WU: 1135747396 Status: Completed and validated Peak working set size 1,351.17 MB Peak swap size 1,324.82 MB Stderr output: <stderr_txt>ftMover.cc:537And continues repeating above until apparently runs out of space. FYI -- Just noting we have another new task type with these same errors/exceptions which still create valid results. The similarity appears to be that these tasks all involve "scaffold grafts." 
|
|
James W Send message Joined: 25 Nov 12 Posts: 130 Credit: 1,766,254 RAC: 0 |
Name: rb_09_28_39311_38407_ab_t000__robetta_cstwt_5.0_FT_IGNORE_THE_REST_08_11_1013728_48_0 Application: Rosetta v4.20 windows_x86_64 Device: 3710630 Task: 1268869051. WU: 1137002647 Status: Error while computing Exit status: 1 (0x00000001) Unknown error code Stderr output: <message>Incorrect function. (0x1) - exit code 1 (0x1)</message>1. Coder/programmer needs to spell "occurred" correctly. 2. Thankful still able to get credit for host's efforts. Note that I rec'd more credit than wingman. |
|
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1725 Credit: 18,399,563 RAC: 19,775
|
Just had a new Task crash out. I've already completed several others of the same type without issue, so i'm waiting to see if my Wingman has the same problem with this Work Unit as well. DNANX53C_DnaN_53C_refine_26_stripped_relax_-1_-1_2_17175399_4mers_0003_SAVE_ALL_OUT_1014011_144_0 <core_client_version>7.6.22</core_client_version>
<![CDATA[
<message>
(unknown error) - exit code -1073741819 (0xc0000005)
</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe @DNANX53C_DnaN_53C_refine_26_stripped_relax_-1_-1_2_17175399_4mers_0003.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1250462
Using database: database_357d5d93529_n_methylminirosetta_database
Unhandled Exception Detected...
- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x000001A0022FD174
Engaging BOINC Windows Runtime Debugger...
********************
BOINC Windows Runtime Debugger Version 7.9.0
Dump Timestamp : 10/01/20 22:08:19
Install Directory : C:Program FilesBOINC
Data Directory : C:ProgramDataBOINC
Project Symstore : https://boinc.bakerlab.org/rosetta/symstore
LoadLibraryA( C:ProgramDataBOINCdbghelp.dll ): GetLastError = 126
Loaded Library : dbghelp.dll
LoadLibraryA( C:ProgramDataBOINCsymsrv.dll ): GetLastError = 126
LoadLibraryA( symsrv.dll ): GetLastError = 126
LoadLibraryA( C:ProgramDataBOINCsrcsrv.dll ): GetLastError = 126
LoadLibraryA( srcsrv.dll ): GetLastError = 126
LoadLibraryA( C:ProgramDataBOINCversion.dll ): GetLastError = 126
Loaded Library : version.dll
Debugger Engine : 4.0.5.0
Symbol Search Path: C:ProgramDataBOINCslots2;C:ProgramDataBOINCprojectsboinc.bakerlab.org_rosetta;srv*C:ProgramDataBOINCprojectsboinc.bakerlab.org_rosettasymbols*http://msdl.microsoft.com/download/symbols;srv*C:ProgramDataBOINCprojectsboinc.bakerlab.org_rosettasymbols*https://boinc.bakerlab.org/rosetta/symstore
ModLoad: 0000000053840000 00000000057ef000 C:ProgramDataBOINCprojectsboinc.bakerlab.org_rosettarosetta_4.20_windows_x86_64.exe (-exported- Symbols Loaded)
Linked PDB Filename : C:cygwin64homeboinc4.17RosettamainsourceideVisualStudiox64BoincReleaserosetta_4.20_windows_x86_64.pdb
ModLoad: 00000000d68e0000 00000000001f0000 C:WINDOWSSYSTEM32ntdll.dll (6.2.18362.815) (-exported- Symbols Loaded)
Linked PDB Filename : ntdll.pdb
File Version : 10.0.18362.329 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.329
ModLoad: 00000000d52f0000 00000000000b2000 C:WINDOWSSystem32KERNEL32.DLL (6.2.18362.959) (-exported- Symbols Loaded)
Linked PDB Filename : kernel32.pdb
File Version : 10.0.18362.959 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.959
ModLoad: 00000000d3b90000 00000000002a4000 C:WINDOWSSystem32KERNELBASE.dll (6.2.18362.997) (-exported- Symbols Loaded)
Linked PDB Filename : kernelbase.pdb
File Version : 10.0.18362.959 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.959
ModLoad: 00000000d6790000 000000000006f000 C:WINDOWSSystem32WS2_32.dll (6.2.18362.387) (-exported- Symbols Loaded)
Linked PDB Filename : ws2_32.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
ModLoad: 00000000d5960000 0000000000120000 C:WINDOWSSystem32RPCRT4.dll (6.2.18362.628) (-exported- Symbols Loaded)
Linked PDB Filename : rpcrt4.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
ModLoad: 00000000d54c0000 0000000000195000 C:WINDOWSSystem32USER32.dll (6.2.18362.997) (-exported- Symbols Loaded)
Linked PDB Filename : user32.pdb
File Version : 10.0.17763.802 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.17763.802
ModLoad: 00000000d3e40000 0000000000021000 C:WINDOWSSystem32win32u.dll (6.2.18362.1016) (-exported- Symbols Loaded)
Linked PDB Filename : win32u.pdb
File Version : 10.0.18362.1016 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1016
ModLoad: 00000000d4990000 0000000000026000 C:WINDOWSSystem32GDI32.dll (6.2.18362.1) (-exported- Symbols Loaded)
Linked PDB Filename : gdi32.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
ModLoad: 00000000d4650000 0000000000196000 C:WINDOWSSystem32gdi32full.dll (6.2.18362.1016) (-exported- Symbols Loaded)
Linked PDB Filename : gdi32full.pdb
File Version : 10.0.18362.1016 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1016
ModLoad: 00000000d38c0000 000000000009e000 C:WINDOWSSystem32msvcp_win.dll (6.2.18362.815) (-exported- Symbols Loaded)
Linked PDB Filename : msvcp_win.pdb
File Version : 10.0.18362.815 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.815
ModLoad: 00000000d3a90000 00000000000fa000 C:WINDOWSSystem32ucrtbase.dll (6.2.18362.815) (-exported- Symbols Loaded)
Linked PDB Filename : ucrtbase.pdb
File Version : 10.0.18362.815 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.815
ModLoad: 00000000d4f90000 00000000000a3000 C:WINDOWSSystem32ADVAPI32.dll (6.2.18362.752) (-exported- Symbols Loaded)
Linked PDB Filename : advapi32.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
ModLoad: 00000000d4ee0000 000000000009e000 C:WINDOWSSystem32msvcrt.dll (7.0.18362.1) (-exported- Symbols Loaded)
Linked PDB Filename : msvcrt.pdb
File Version : 7.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 7.0.18362.1
ModLoad: 00000000d6800000 0000000000097000 C:WINDOWSSystem32sechost.dll (6.2.18362.959) (-exported- Symbols Loaded)
Linked PDB Filename : sechost.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
ModLoad: 00000000d5420000 000000000002e000 C:WINDOWSSystem32IMM32.DLL (6.2.18362.387) (-exported- Symbols Loaded)
Linked PDB Filename : imm32.pdb
File Version : 10.0.18362.387 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.387
ModLoad: 00000000d37a0000 0000000000011000 C:WINDOWSSystem32kernel.appcore.dll (6.2.18362.1) (-exported- Symbols Loaded)
Linked PDB Filename : Kernel.Appcore.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
ModLoad: 00000000d27e0000 0000000000031000 C:WINDOWSSYSTEM32ntmarta.dll (6.2.18362.1) (-exported- Symbols Loaded)
Linked PDB Filename : ntmarta.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
ModLoad: 00000000ccc90000 00000000001f4000 C:WINDOWSSYSTEM32dbghelp.dll (6.2.18362.1) (-exported- Symbols Loaded)
Linked PDB Filename : dbghelp.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
ModLoad: 00000000d3a10000 0000000000080000 C:WINDOWSSystem32bcryptPrimitives.dll (6.2.18362.836) (-exported- Symbols Loaded)
Linked PDB Filename : bcryptprimitives.pdb
File Version : 10.0.18362.836 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.836
ModLoad: 00000000cde40000 000000000000a000 C:WINDOWSSYSTEM32version.dll (6.2.18362.1) (-exported- Symbols Loaded)
Linked PDB Filename : version.pdb
File Version : 10.0.18362.1 (WinBuild.160101.0800)
Company Name : Microsoft Corporation
Product Name : Microsoft® Windows® Operating System
Product Version : 10.0.18362.1
*** Dump of the Process Statistics: ***
- I/O Operations Counters -
Read: 5001, Write: 665, Other 13717
- I/O Transfers Counters -
Read: 14505587, Write: 14753, Other 6694
- Paged Pool Usage -
QuotaPagedPoolUsage: 317480, QuotaPeakPagedPoolUsage: 317608
QuotaNonPagedPoolUsage: 6792, QuotaPeakNonPagedPoolUsage: 7352
- Virtual Memory Usage -
VirtualSize: 83030016, PeakVirtualSize: 895672320
- Pagefile Usage -
PagefileUsage: 83030016, PeakPagefileUsage: 83030016
- Working Set Size -
WorkingSetSize: 103563264, PeakWorkingSetSize: 103567360, PageFaultCount: 25695
*** Dump of thread ID 8588 (state: Initialized): ***
- Information -
Status: Base Priority: Normal, Priority: Normal, , Kernel Time: 0.000000, User Time: 0.000000, Wait Time: 0.000000
- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x000001A0022FD174
- Registers -
rax=000000000000003a rbx=0000000001815b70 rcx=000000000220bac0 rdx=00000000022ebbf8 rsi=000000000000000b rdi=000000000220bac0
r8=000000000000003a r9=0000000000000421 r10=00000000573e6e80 r11=00000000ee345440 r12=0000000053840000 r13=00000000ee35fb80
r14=00000000ee345b80 r15=000000000048b215 rip=00000000022fd174 rsp=00000000ee3454b8 rbp=0000000000000000
cs=0033 ss=002b ds=002b es=002b fs=0053 gs=002b efl=00010206
- Callstack -
ChildEBP RetAddr Args to Child
ee3454b0 53d1831c 00000000 573e6d60 573e6e80 573cbe78 !+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '022fd174'
ee3454e0 53cd935d 01815b70 ee345580 ee345d00 53cc355d rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53d1831c'
ee345510 56e47f10 57d30150 ee35fb80 00000000 53cc3265 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53cd935d'
ee345540 53cc39e8 ee3461f0 28d1e4a7 ee345b48 ee345bd0 rosetta_4.20_windows_x86_64!xmlValidateNotationDecl+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '56e47f10'
ee3455b0 d69811cf 00000000 ee345b30 ee3461f0 ee3461f0 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53cc39e8'
ee3455e0 d694a209 00000001 53840000 00000000 58dda32c ntdll!__chkstk+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = 'd69811cf'
ee345cf0 d697fe3e 00000020 00000000 574ba450 00000003 ntdll!RtlRaiseException+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = 'd694a209'
ee3464a0 53f83e2b fffffffe 05b74158 ffffffff 53f918c5 ntdll!KiUserExceptionDispatcher+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = 'd697fe3e'
ee3464f0 53f93690 574ba3a0 05b73eb0 574ba3a0 ee3465e9 rosetta_4.20_windows_x86_64!cppdb::session::is_open+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53f83e2b'
ee346620 540a9ee8 054fcba8 050e2be0 05b73eb0 050e2be0 rosetta_4.20_windows_x86_64!cppdb::session::is_open+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53f93690'
ee3471d0 54044b6c 05feeef0 d691b997 01770000 00000000 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '540a9ee8'
ee3473d0 5404488e ee3474b8 00000000 ee3476a0 00000000 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '54044b6c'
ee347530 53fa3da1 ee3476a8 00000000 01813aa0 ee347770 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '5404488e'
ee3478f0 53fa9f08 ee347c40 ee347c40 ee347c40 00000000 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53fa3da1'
ee347f40 53fa84db 01ef59c0 ee347fa0 01d9f330 01d9f330 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53fa9f08'
ee3480a0 53f11fb7 00000000 ee3481b0 01d9f330 ee3483b0 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53fa84db'
ee348210 53f157a6 00000005 53cb5190 01da6270 01da6270 rosetta_4.20_windows_x86_64!cppdb::session::is_open+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53f11fb7'
ee348280 53f156cc ee348588 ee3483f9 ee348588 01d9f330 rosetta_4.20_windows_x86_64!cppdb::session::is_open+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53f157a6'
ee348330 53fdb6f5 ee348588 ee348841 00000000 53cd75e8 rosetta_4.20_windows_x86_64!cppdb::session::is_open+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53f156cc'
ee348450 53fda592 00000005 ee348588 ee348760 00000000 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53fdb6f5'
ee348520 53fdad06 00000000 00000000 ee348e40 01770000 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53fda592'
ee3486c0 544371a3 ee348760 ee348e40 ffffff01 53cc3e73 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53fdad06'
ee3489b0 54439d09 00000000 00000001 ee348ac0 ee348e40 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '544371a3'
ee348d40 54432f8a ee348d80 ee348e40 05340dd0 01de8460 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '54439d09'
ee348da0 5464cc70 ee348e40 ee349568 01da6270 00000000 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '54432f8a'
ee349530 5464c6e4 05ed6aa0 05d8a3d0 58cb5cc0 53cb75a6 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '5464cc70'
ee349590 5465603e ee349680 05ed67d0 ee3496a0 ee349df0 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '5464c6e4'
ee349d10 546556d4 73665952 73665e42 58c27f70 54676cb4 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '5465603e'
ee349da0 5465578e 00000005 ee34a348 01de8460 00000001 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '546556d4'
ee349f40 53cc081d 020d8820 020d8820 01de8460 01816f01 rosetta_4.20_windows_x86_64!cppdb::backend::statement::cache+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '5465578e'
ee35fb70 53ccb215 00000000 00000000 58beccf8 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53cc081d'
ee35fbb0 d5307bd4 00000000 00000000 00000000 00000000 rosetta_4.20_windows_x86_64!xmlParserInputRead+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = '53ccb215'
ee35fbe0 d694ce51 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = 'd5307bd4'
ee35fc60 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0 SymFromAddr(): GetLastError = '126' SymGetModuleInfo(): GetLastError = '126' Address = 'd694ce51'
*** Dump of thread ID 32760 (state: Initialized): ***
- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 6.000000, User Time: 0.000000, Wait Time: 3139226624.000000
- Registers -
rax=0000000000000000 rbx=0000000000000000 rcx=0000000000000000 rdx=0000000000000000 rsi=0000000000000000 rdi=0000000000000000
r8=0000000000000000 r9=0000000000000000 r10=0000000000000000 r11=0000000000000000 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=0000000000000000 rsp=0000000000000000 rbp=0000000000000000
cs=0000 ss=0000 ds=0000 es=0000 fs=0000 gs=0000 efl=00000000
- Callstack -
ChildEBP RetAddr Args to Child
(-nosymbols- PC == 0)
00000000 00000000 00000000 00000000 00000000 00000000 !+0x0
*** Dump of thread ID 30840815 (state: Unknown): ***
- Information -
Status: Base Priority: Normal, Priority: Unknown, , Kernel Time: 17179869184.000000, User Time: 21474836480.000000, Wait Time: 0.000000
- Registers -
rax=0000000000000000 rbx=0000000000000000 rcx=0000000000000000 rdx=0000000000000000 rsi=0000000000000000 rdi=0000000000000000
r8=0000000000000000 r9=0000000000000000 r10=0000000000000000 r11=0000000000000000 r12=0000000000000000 r13=0000000000000000
r14=0000000000000000 r15=0000000000000000 rip=0000000000000000 rsp=0000000000000000 rbp=0000000000000000
cs=0000 ss=0000 ds=0000 es=0000 fs=0000 gs=0000 efl=00000000
- Callstack -
ChildEBP RetAddr Args to Child
(-nosymbols- PC == 0)
00000000 00000000 00000000 00000000 00000000 00000000 !+0x0
*** Debug Message Dump ****
*** Foreground Window Data ***
Window Name :
Window Class :
Window Process ID: 0
Window Thread ID : 0
Exiting...
</stderr_txt>
]]>Grant Darwin NT |
mikey Send message Joined: 5 Jan 06 Posts: 1895 Credit: 9,214,418 RAC: 1,328 
|
Just had a new Task crash out. I've already completed several others of the same type without issue, so i'm waiting to see if my Wingman has the same problem with this Work Unit as well. You are using a REALLY old version of Boinc, is that by design or you just haven't updated? The current version is 7.16.11 for Windows. |
|
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1725 Credit: 18,399,563 RAC: 19,775
|
You are using a REALLY old version of Boinc, is that by design or you just haven't updated?BOINC is just the manager (it's the project's applications that actually process work), and if something isn't broken, then don't fix it. The only useful thing in the last few versions is that the latest one appears to support a project going from HTTP to HTTPS without the user having to do it. I may eventually upgrade when i've had enough of the Notices about using an old URL. Grant Darwin NT |
|
James W Send message Joined: 25 Nov 12 Posts: 130 Credit: 1,766,254 RAC: 0 |
Name: DNANX53C_DnaN_53C_refine_26_stripped_relax_-1_-1_3_45942938_4mers_0002_SAVE_ALL_OUT_1014073_330_0 Application: Rosetta v4.20 windows_x86_64 Device: 3710630 Task: 1270233986. WU: 1138185669 Status: Error while computing Exit status: -1073741819 (0xC0000005) STATUS_ACCESS_VIOLATION Stderr output: (unknown error) - exit code -1073741819 (0xc0000005)Also rec'd identical error on host 1759960 for task 1270067381. Will see how wingman fares. |
Message boards :
Number crunching :
Rosetta 4.1+ and 4.2+
©2024 University of Washington
https://www.bakerlab.org