Help me running on CentOS

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ta@HokkaidoUniv

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Joined: 13 Oct 17
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Message 87570 - Posted: 26 Oct 2017, 18:38:50 UTC

Hi, I'm having trouble with running Rosetta on my CentOS 6.9 VPS. It seems I succeeded in attaching Rosetta to my boinc_client, but seems that it's not calculating at all. What should I do?

Results of "boinccmd --get_state" is written below:
======== Projects ========
1) -----------
name: Rosetta@home
master URL: http://boinc.bakerlab.org/rosetta/
user_name: ta@campus
team_name: Team 2ch
resource share: 100.000000
user_total_credit: 14211.060030
user_expavg_credit: 968.626573
host_total_credit: 0.000000
host_expavg_credit: 0.000000
nrpc_failures: 0
master_fetch_failures: 0
master fetch pending: no
scheduler RPC pending: no
trickle upload pending: no
attached via Account Manager: no
ended: no
suspended via GUI: no
don't request more work: no
disk usage: 0.000000
last RPC: 1509041764.933907
project files downloaded: 0.000000
GUI URL:
name: Message boards
description: Correspond with other users on the Rosetta@home message boards
URL: http://boinc.bakerlab.org/rosetta/forum_index.php
GUI URL:
name: Your account
description: View your account information
URL: http://boinc.bakerlab.org/rosetta/home.php
GUI URL:
name: Your tasks
description: View the last week or so of computational work
URL: http://boinc.bakerlab.org/rosetta/results.php?userid=1954203
GUI URL:
name: Your team
description: View information about your team: Team 2ch
URL: http://boinc.bakerlab.org/rosetta/team_display.php?teamid=454

======== Applications ========
1) -----------
name: minirosetta
Project: Rosetta@home

======== Application versions ========
1) -----------
application: minirosetta
version: 3.78
project: Rosetta@home

======== Workunits ========
1) -----------
name: G198466_1-236_TEST_v02_t000__krypton_SAVE_ALL_OUT_03_09_523068_1205
FP estimate: 8.000000e+13
FP bound: 5.000000e+16
memory bound: 95.37 MB
disk bound: 953.67 MB
2) -----------
name: apo_pin_GxGRxG_scored_sat_nocys_hbnet3_mg_rossmann_pdb_2X58_clean_chain_A_cofactor_ADP_id_2__no6xHis_or386.v1.NMR_model_10_0001_0003_0001_0001_0001_fragments_fold_SAVE_ALL_OUT_524766_536
FP estimate: 8.000000e+13
FP bound: 5.000000e+16
memory bound: 95.37 MB
disk bound: 953.67 MB
3) -----------
name: GCNTF2R5_fold_SAVE_ALL_OUT_524695_446
FP estimate: 8.000000e+13
FP bound: 5.000000e+16
memory bound: 95.37 MB
disk bound: 953.67 MB
4) -----------
name: G000149_15-245_TEST_v02_t000__krypton_SAVE_ALL_OUT_03_09_522912_1204
FP estimate: 8.000000e+13
FP bound: 5.000000e+16
memory bound: 95.37 MB
disk bound: 953.67 MB

======== Tasks ========
1) -----------
name: GCNTF2R5_fold_SAVE_ALL_OUT_524695_446_0
WU name: GCNTF2R5_fold_SAVE_ALL_OUT_524695_446
project URL: http://boinc.bakerlab.org/rosetta/
report deadline: Fri Nov 3 15:29:53 2017
ready to report: no
got server ack: no
final CPU time: 0.000000
state: downloaded
scheduler state: uninitialized
exit_status: 0
signal: 0
suspended via GUI: no
active_task_state: UNINITIALIZED
app version num: 0
checkpoint CPU time: 0.000000
current CPU time: 0.000000
fraction done: 0.000000
swap size: 0.000000
working set size: 0.000000
estimated CPU time remaining: 51922.724197
2) -----------
name: G198466_1-236_TEST_v02_t000__krypton_SAVE_ALL_OUT_03_09_523068_1205_0
WU name: G198466_1-236_TEST_v02_t000__krypton_SAVE_ALL_OUT_03_09_523068_1205
project URL: http://boinc.bakerlab.org/rosetta/
report deadline: Fri Nov 3 15:29:53 2017
ready to report: no
got server ack: no
final CPU time: 0.000000
state: downloaded
scheduler state: uninitialized
exit_status: 0
signal: 0
suspended via GUI: no
active_task_state: UNINITIALIZED
app version num: 0
checkpoint CPU time: 0.000000
current CPU time: 0.000000
fraction done: 0.000000
swap size: 0.000000
working set size: 0.000000
estimated CPU time remaining: 51922.724197
3) -----------
name: apo_pin_GxGRxG_scored_sat_nocys_hbnet3_mg_rossmann_pdb_2X58_clean_chain_A_cofactor_ADP_id_2__no6xHis_or386.v1.NMR_model_10_0001_0003_0001_0001_0001_fragments_fold_SAVE_ALL_OUT_524766_536_0
WU name: apo_pin_GxGRxG_scored_sat_nocys_hbnet3_mg_rossmann_pdb_2X58_clean_chain_A_cofactor_ADP_id_2__no6xHis_or386.v1.NMR_model_10_0001_0003_0001_0001_0001_fragments_fold_SAVE_ALL_OUT_524766_536
project URL: http://boinc.bakerlab.org/rosetta/
report deadline: Fri Nov 3 15:29:53 2017
ready to report: no
got server ack: no
final CPU time: 0.000000
state: downloaded
scheduler state: uninitialized
exit_status: 0
signal: 0
suspended via GUI: no
active_task_state: UNINITIALIZED
app version num: 0
checkpoint CPU time: 0.000000
current CPU time: 0.000000
fraction done: 0.000000
swap size: 0.000000
working set size: 0.000000
estimated CPU time remaining: 51922.724197
4) -----------
name: G000149_15-245_TEST_v02_t000__krypton_SAVE_ALL_OUT_03_09_522912_1204_0
WU name: G000149_15-245_TEST_v02_t000__krypton_SAVE_ALL_OUT_03_09_522912_1204
project URL: http://boinc.bakerlab.org/rosetta/
report deadline: Fri Nov 3 15:29:53 2017
ready to report: no
got server ack: no
final CPU time: 0.000000
state: downloaded
scheduler state: uninitialized
exit_status: 0
signal: 0
suspended via GUI: no
active_task_state: UNINITIALIZED
app version num: 0
checkpoint CPU time: 0.000000
current CPU time: 0.000000
fraction done: 0.000000
swap size: 0.000000
working set size: 0.000000
estimated CPU time remaining: 51922.724197

======== Time stats ========
now: 1509042361.220644
on_frac: 0.998501
connected_frac: -1.000000
cpu_and_network_available_frac: 0.906628
active_frac: 0.906628
gpu_active_frac: 0.906628
client_start_time: 1508957040.564320
previous_uptime: 85320.656324
ID: 87570 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote

Questions and Answers : Unix/Linux : Help me running on CentOS



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