Sort Least recent post firstMost recent post firstHighest rated posts first

Author	Message
Mike Tyka Forum moderator Project administrator Project developer Project scientist Joined: Oct 20 05 Posts: 96 ID: 5612 Credit: 2,190 RAC: 0	Message 65733 - Posted 12 Apr 2010 18:35:26 UTC
	This is the first update for some time, we've added a lot of functionality, maybe Sarel can comment in more detail ? Please post bug reports here ! ____________ http://beautifulproteins.blogspot.com/ http://www.miketyka.com/
	ID: 65733 | Rating: 0 | rate: /
Sarel Forum moderator Project administrator Project developer Project scientist Joined: May 11 06 Posts: 51 ID: 81994 Credit: 81,712 RAC: 0	Message 65737 - Posted 13 Apr 2010 0:43:47 UTC
	As David mentioned in his recent posts (see link below), we've recently identified a redesigned protein that binds specifically to influenza. We're all very excited about this result and experimental tests are under way. Importantly, this design came from one of the previous batches of ProteinInterfaceDesign protocols that I sent out during January and February and this would not have been possible if it weren't for your contributions! I'm very excited to see whether we can get more designs that bind so effectively to influenza! The current update has some features that will help us sample different scaffolds more efficiently. I've submitted a small-scale run to Rosetta @ Home to see that all of the protocols run well on your computers and will gradually increase their size over the next few weeks. Please report any problems. Many thanks! Link to David's blog entry: http://boinc.bakerlab.org/forum_thread.php?id=1177&nowrap=true#65709 If you have any questions and comments on the influenza binder please post them here: http://boinc.bakerlab.org/forum_thread.php?id=4477 ____________
	ID: 65737 | Rating: 0 | rate: /
Paul D. Buck Joined: Sep 17 05 Posts: 815 ID: 269 Credit: 1,383,092 RAC: 0	Message 65745 - Posted 15 Apr 2010 8:15:39 UTC
	I woke to a crash of this task that put a pop-up dialog box on my computer that had to be dismissed. In the mean time, the task was "locked" so my computer was sub-optimal in running ... in essence I had an idle core ... un-good ...
	ID: 65745 | Rating: 0 | rate: /
svincent Joined: Dec 30 05 Posts: 169 ID: 44923 Credit: 1,706,506 RAC: 753	Message 65751 - Posted 16 Apr 2010 14:59:12 UTC
	Task 331986155 gave Compute Error on Mac. Starting watchdog... Watchdog active. terminate called after throwing an instance of 'std::bad_alloc' what(): std::bad_alloc SIGABRT: abort called + tons of debug info
	ID: 65751 | Rating: 0 | rate: /
BiggerBetterDeal Joined: Nov 13 09 Posts: 1 ID: 358241 Credit: 185,349 RAC: 0	Message 65759 - Posted 17 Apr 2010 4:38:48 UTC
	I have had tasks the last two evenings that have ended with computation errors and have forced an exception end to the C++ Runtime environment. I could send the event log if it would help in debug (posting now without checking first to see if you already specified what to provide you - will look now after the fact)- running XP SP3 on a Dual Core processor with 4GB RAM.
	ID: 65759 | Rating: 0 | rate: /
Sarel Forum moderator Project administrator Project developer Project scientist Joined: May 11 06 Posts: 51 ID: 81994 Credit: 81,712 RAC: 0	Message 65764 - Posted 17 Apr 2010 15:55:31 UTC
	The crashes with bad alloc all come from the same set of runs, which share in common a different type of input file. I'm not sure what's causing the crash so in the meantime, I've eliminated these runs from the queue. Work units that have already been sent out will still run (and it looks like the crashes are rare events) but they should be ending within the next day or two. I'll let you know before I relaunch this type of job what was the problem. Thanks, Sarel. ____________
	ID: 65764 | Rating: 0 | rate: /
svincent Joined: Dec 30 05 Posts: 169 ID: 44923 Credit: 1,706,506 RAC: 753	Message 65799 - Posted 21 Apr 2010 22:37:18 UTC
	Task 332824621 (t469__boinc_rosetta_cm_loopbuild_threading_tex_IGNORE_THE_REST_19621_1890_0) gave a Validate Error on Mac. "Too many error results" according to the Workunit Log. A wingman ran into the same problem on W7.
	ID: 65799 | Rating: 0 | rate: /

Message boards : Number crunching : Minirosetta 2.10