Problems with Rosetta version 5.41

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Chu

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Message 31881 - Posted: 1 Dec 2006, 1:44:05 UTC
Last modified: 1 Dec 2006, 1:44:26 UTC

Please report here. Thanks.
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Profile [B^S] Gamma^Ray
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Message 31932 - Posted: 2 Dec 2006, 8:12:29 UTC

Hi, Just had a work unit fail on my older machine (p4, Windows ME. 5.2.13), With the following errors listed:

Workunit 44361031 Exit status -1073741819 (0xc0000005)

<core_client_version>5.2.13</core_client_version>
<message> - exit code -1073741819 (0xc0000005)
</message>
<stderr_txt>
# random seed: 2137584
# cpu_run_time_pref: 14400


Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x007B69BD read attempt to address 0xFFFFFFFF

StackWalk(): GetLastError = 126


The Graphics were showing when it errored.

G^R
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Message 31941 - Posted: 2 Dec 2006, 15:50:10 UTC

Yes. I am. Running only Rosetta. Any clues

From ther Boinc message board:
for the past few days 11/15/06 the BONIC Manager can not fine the local host. all processing stops. running 5.4.11. on 24/7. running 4 or more projects round robin. only way to get working again is to exit and re-start. any idea why this is happing. any one else have the same issue?
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Message 31942 - Posted: 2 Dec 2006, 15:54:04 UTC

I have had this same issue since I started using BOINC over a year ago. It happens randomly most of the time. It is really annoying to exit and restart BOINC to get the projects running again. I am on the most current version of BOINC and Rosetta and it has happened on more than one of my computers.
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Message 31944 - Posted: 2 Dec 2006, 16:34:50 UTC
Last modified: 2 Dec 2006, 16:35:16 UTC

Ed/Darin, please see the active discussion on the subject of BOINC manager losing contact with the boince.exe.
If having a DC project with BOINC is of interest to you, with volunteer or cloud computing resources, but have no time for the BOINC learning curve,
use a hosting service that understands BOINC projects: http://DeepSci.com
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Message 31949 - Posted: 2 Dec 2006, 16:49:55 UTC

One of my machines (running Linux) is giving errors on ALL WUs from 5.41 - this never happened with 5.40. Example WU: http://boinc.bakerlab.org/rosetta/result.php?resultid=50074717

stderr out:

<core_client_version>5.4.9</core_client_version>
<message>
process exited with code 131 (0x83)
</message>
<stderr_txt>
Graphics are disabled due to configuration...
# random seed: 2641103
# cpu_run_time_pref: 86400
SIGILL: illegal instruction
Stack trace (25 frames):
[0x8a47b6f]
[0x8a638bc]
[0xffffe420]
[0x86a9a82]
[0x88c96c3]
[0x88cd3be]
[0x861a3f0]
[0x861c62c]
[0x861e38f]
[0x862b559]
[0x88d8f69]
[0x88ded79]
[0x88e0727]
[0x890dbb0]
[0x890edff]
[0x804cf56]
[0x8742107]
[0x8745e8c]
[0x8746cc0]
[0x82ef851]
[0x84c998f]
[0x85dd0a3]
[0x85dd14c]
[0x8ac2da4]
[0x8048111]

Exiting...

</stderr_txt>

I\'m going to have to stop Rosetta@Home on this machine if it keeps doing this.
"In the beginning the universe was created. This made a lot of people very angry and is widely considered as a bad move." - The Hitchhiker's Guide to the Galaxy
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Message 31955 - Posted: 2 Dec 2006, 18:46:16 UTC
Last modified: 2 Dec 2006, 18:46:44 UTC

BOINC 5.41 has now crashed 3 times today on my machine. I only have data on the last 2 because the first one caused a hard freeze which required me to cold boot my system. I don\'t have data because I shut my system down every night, but BOINC has been bouncing like a ball for the last couple of weeks, frankly, and I\'ve had to hard boot more than once. I\'m hoping this data will help fix the problem.

Here\'s today\'s log data:

12/02/2006 8:31:20 AM||Starting BOINC client version 5.4.11 for windows_intelx86
12/02/2006 8:31:20 AM||libcurl/7.15.3 OpenSSL/0.9.8a zlib/1.2.3
12/02/2006 8:31:20 AM||Data directory: C:\\Program Files\\BOINC
12/02/2006 8:31:20 AM||Processor: 2 GenuineIntel Intel(R) Pentium(R) 4 CPU 3.20GHz
12/02/2006 8:31:20 AM||Memory: 1022.09 MB physical, 2.40 GB virtual
12/02/2006 8:31:20 AM||Disk: 145.27 GB total, 121.06 GB free
12/02/2006 8:31:20 AM|rosetta@home|URL: http://boinc.bakerlab.org/rosetta/; Computer ID: 272841; location: home; project prefs: default
12/02/2006 8:31:20 AM||No general preferences found - using BOINC defaults
12/02/2006 8:31:20 AM||Local control only allowed
12/02/2006 8:31:20 AM||Listening on port 31416
12/02/2006 8:31:20 AM|rosetta@home|Resuming task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 using rosetta version 541
12/02/2006 8:31:20 AM|rosetta@home|Resuming task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 using rosetta version 541
12/02/2006 10:35:23 AM|rosetta@home|Unrecoverable error for result s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 ( - exit code 1073807364 (0x40010004))
12/02/2006 10:35:23 AM|rosetta@home|Deferring scheduler requests for 1 minutes and 0 seconds
12/02/2006 10:35:23 AM||Rescheduling CPU: application exited
12/02/2006 10:35:23 AM|rosetta@home|Computation for task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 finished
12/02/2006 10:35:46 AM|rosetta@home|Unrecoverable error for result s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 ( - exit code 1073807364 (0x40010004))
12/02/2006 10:35:46 AM|rosetta@home|Deferring scheduler requests for 1 minutes and 0 seconds
12/02/2006 10:35:46 AM||Rescheduling CPU: application exited
12/02/2006 10:35:46 AM|rosetta@home|Computation for task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 finished
12/02/2006 10:36:46 AM|rosetta@home|Sending scheduler request to http://boinc.bakerlab.org/rosetta_cgi/cgi

>> Event log for the first hang:
Hanging application rosetta_5.41_windows_intelx86.exe, version 0.0.0.0, hang module hungapp, version 0.0.0.0, hang address 0x00000000.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.

Fault bucket 353414255.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.


>> Event log for the second hang:
Hanging application rosetta_5.41_windows_intelx86.exe, version 0.0.0.0, hang module hungapp, version 0.0.0.0, hang address 0x00000000.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.

Fault bucket 353414255.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.

--hedera

Never be afraid to try something new. Remember that amateurs built the ark. Professionals built the Titanic.

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Chu

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Message 31963 - Posted: 2 Dec 2006, 20:17:34 UTC - in response to Message 31949.  

Hi, it looks a problem of not getting new application correctly. Does this still happen if you force a clean update to get the 5.41 application again?
One of my machines (running Linux) is giving errors on ALL WUs from 5.41 - this never happened with 5.40. Example WU: http://boinc.bakerlab.org/rosetta/result.php?resultid=50074717

stderr out:

<core_client_version>5.4.9</core_client_version>
<message>
process exited with code 131 (0x83)
</message>
<stderr_txt>
Graphics are disabled due to configuration...
# random seed: 2641103
# cpu_run_time_pref: 86400
SIGILL: illegal instruction
Stack trace (25 frames):
[0x8a47b6f]
[0x8a638bc]
[0xffffe420]
[0x86a9a82]
[0x88c96c3]
[0x88cd3be]
[0x861a3f0]
[0x861c62c]
[0x861e38f]
[0x862b559]
[0x88d8f69]
[0x88ded79]
[0x88e0727]
[0x890dbb0]
[0x890edff]
[0x804cf56]
[0x8742107]
[0x8745e8c]
[0x8746cc0]
[0x82ef851]
[0x84c998f]
[0x85dd0a3]
[0x85dd14c]
[0x8ac2da4]
[0x8048111]

Exiting...

</stderr_txt>

I\'m going to have to stop Rosetta@Home on this machine if it keeps doing this.


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Chu

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Message 31965 - Posted: 2 Dec 2006, 20:29:01 UTC - in response to Message 31955.  

Hi Hedera, did you have the Rosetta graphics on when these errors happened? I definitely have seen the same error code before from different hosts and from different WUS in a very random way. I am just trying to collect more information to see if we can find any clue of the cause for the problem. The graphic lock-ups have been reported most frequently with the recent rosetta applications and we are investigating it. Wondering if this also applies to the error you have encounted.
BOINC 5.41 has now crashed 3 times today on my machine. I only have data on the last 2 because the first one caused a hard freeze which required me to cold boot my system. I don\'t have data because I shut my system down every night, but BOINC has been bouncing like a ball for the last couple of weeks, frankly, and I\'ve had to hard boot more than once. I\'m hoping this data will help fix the problem.

Here\'s today\'s log data:

12/02/2006 8:31:20 AM||Starting BOINC client version 5.4.11 for windows_intelx86
12/02/2006 8:31:20 AM||libcurl/7.15.3 OpenSSL/0.9.8a zlib/1.2.3
12/02/2006 8:31:20 AM||Data directory: C:\\Program Files\\BOINC
12/02/2006 8:31:20 AM||Processor: 2 GenuineIntel Intel(R) Pentium(R) 4 CPU 3.20GHz
12/02/2006 8:31:20 AM||Memory: 1022.09 MB physical, 2.40 GB virtual
12/02/2006 8:31:20 AM||Disk: 145.27 GB total, 121.06 GB free
12/02/2006 8:31:20 AM|rosetta@home|URL: http://boinc.bakerlab.org/rosetta/; Computer ID: 272841; location: home; project prefs: default
12/02/2006 8:31:20 AM||No general preferences found - using BOINC defaults
12/02/2006 8:31:20 AM||Local control only allowed
12/02/2006 8:31:20 AM||Listening on port 31416
12/02/2006 8:31:20 AM|rosetta@home|Resuming task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 using rosetta version 541
12/02/2006 8:31:20 AM|rosetta@home|Resuming task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 using rosetta version 541
12/02/2006 10:35:23 AM|rosetta@home|Unrecoverable error for result s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 ( - exit code 1073807364 (0x40010004))
12/02/2006 10:35:23 AM|rosetta@home|Deferring scheduler requests for 1 minutes and 0 seconds
12/02/2006 10:35:23 AM||Rescheduling CPU: application exited
12/02/2006 10:35:23 AM|rosetta@home|Computation for task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 finished
12/02/2006 10:35:46 AM|rosetta@home|Unrecoverable error for result s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 ( - exit code 1073807364 (0x40010004))
12/02/2006 10:35:46 AM|rosetta@home|Deferring scheduler requests for 1 minutes and 0 seconds
12/02/2006 10:35:46 AM||Rescheduling CPU: application exited
12/02/2006 10:35:46 AM|rosetta@home|Computation for task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 finished
12/02/2006 10:36:46 AM|rosetta@home|Sending scheduler request to http://boinc.bakerlab.org/rosetta_cgi/cgi

>> Event log for the first hang:
Hanging application rosetta_5.41_windows_intelx86.exe, version 0.0.0.0, hang module hungapp, version 0.0.0.0, hang address 0x00000000.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.

Fault bucket 353414255.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.


>> Event log for the second hang:
Hanging application rosetta_5.41_windows_intelx86.exe, version 0.0.0.0, hang module hungapp, version 0.0.0.0, hang address 0x00000000.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.

Fault bucket 353414255.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.


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Message 31967 - Posted: 2 Dec 2006, 20:35:09 UTC - in response to Message 31965.  

Sorry about that - hit the \"post\" button before I was done. As I was saying, I normally run the BOINC graphics screen saver, I should have remembered to mention that. I\'ve been coming back to my machine and finding the screen saver frozen, but most of the the time I can pull up the Windows Task Manager and kill the \"not responding\" routine, which clears the screen. That\'s what happened with both of those.

Hi Hedera, did you have the Rosetta graphics on when these errors happened? I definitely have seen the same error code before from different hosts and from different WUS in a very random way. I am just trying to collect more information to see if we can find any clue of the cause for the problem. The graphic lock-ups have been reported most frequently with the recent rosetta applications and we are investigating it. Wondering if this also applies to the error you have encounted.
BOINC 5.41 has now crashed 3 times today on my machine. I only have data on the last 2 because the first one caused a hard freeze which required me to cold boot my system. I don\'t have data because I shut my system down every night, but BOINC has been bouncing like a ball for the last couple of weeks, frankly, and I\'ve had to hard boot more than once. I\'m hoping this data will help fix the problem.

Here\'s today\'s log data:

12/02/2006 8:31:20 AM||Starting BOINC client version 5.4.11 for windows_intelx86
12/02/2006 8:31:20 AM||libcurl/7.15.3 OpenSSL/0.9.8a zlib/1.2.3
12/02/2006 8:31:20 AM||Data directory: C:\\Program Files\\BOINC
12/02/2006 8:31:20 AM||Processor: 2 GenuineIntel Intel(R) Pentium(R) 4 CPU 3.20GHz
12/02/2006 8:31:20 AM||Memory: 1022.09 MB physical, 2.40 GB virtual
12/02/2006 8:31:20 AM||Disk: 145.27 GB total, 121.06 GB free
12/02/2006 8:31:20 AM|rosetta@home|URL: http://boinc.bakerlab.org/rosetta/; Computer ID: 272841; location: home; project prefs: default
12/02/2006 8:31:20 AM||No general preferences found - using BOINC defaults
12/02/2006 8:31:20 AM||Local control only allowed
12/02/2006 8:31:20 AM||Listening on port 31416
12/02/2006 8:31:20 AM|rosetta@home|Resuming task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 using rosetta version 541
12/02/2006 8:31:20 AM|rosetta@home|Resuming task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 using rosetta version 541
12/02/2006 10:35:23 AM|rosetta@home|Unrecoverable error for result s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 ( - exit code 1073807364 (0x40010004))
12/02/2006 10:35:23 AM|rosetta@home|Deferring scheduler requests for 1 minutes and 0 seconds
12/02/2006 10:35:23 AM||Rescheduling CPU: application exited
12/02/2006 10:35:23 AM|rosetta@home|Computation for task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom012__1406_13991_0 finished
12/02/2006 10:35:46 AM|rosetta@home|Unrecoverable error for result s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 ( - exit code 1073807364 (0x40010004))
12/02/2006 10:35:46 AM|rosetta@home|Deferring scheduler requests for 1 minutes and 0 seconds
12/02/2006 10:35:46 AM||Rescheduling CPU: application exited
12/02/2006 10:35:46 AM|rosetta@home|Computation for task s014__BOINC_ABRELAX_SAVE_ALL_OUT_hom019__1406_11651_1 finished
12/02/2006 10:36:46 AM|rosetta@home|Sending scheduler request to http://boinc.bakerlab.org/rosetta_cgi/cgi

>> Event log for the first hang:
Hanging application rosetta_5.41_windows_intelx86.exe, version 0.0.0.0, hang module hungapp, version 0.0.0.0, hang address 0x00000000.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.

Fault bucket 353414255.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.


>> Event log for the second hang:
Hanging application rosetta_5.41_windows_intelx86.exe, version 0.0.0.0, hang module hungapp, version 0.0.0.0, hang address 0x00000000.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.

Fault bucket 353414255.

For more information, see Help and Support Center at http://go.microsoft.com/fwlink/events.asp.



--hedera

Never be afraid to try something new. Remember that amateurs built the ark. Professionals built the Titanic.

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Message 31968 - Posted: 2 Dec 2006, 20:55:03 UTC

There have been a lot of graphics-crashing in Rosetta lately. I suggest not using the graphics at all until it clears up. It\'s safest that way.
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Message 31970 - Posted: 2 Dec 2006, 21:00:10 UTC - in response to Message 31968.  

With regret, I\'ve turned on another screen saver. Somebody please post here when it\'s safe to run graphics again? I do enjoy the BOINC graphics.

There have been a lot of graphics-crashing in Rosetta lately. I suggest not using the graphics at all until it clears up. It\'s safest that way.


--hedera

Never be afraid to try something new. Remember that amateurs built the ark. Professionals built the Titanic.

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Message 31971 - Posted: 2 Dec 2006, 21:08:21 UTC - in response to Message 31963.  

Hi, it looks a problem of not getting new application correctly. Does this still happen if you force a clean update to get the 5.41 application again?

It was actually a fresh install to begin with, but so far the 2 current WUs have been going for several hours without any problems.
"In the beginning the universe was created. This made a lot of people very angry and is widely considered as a bad move." - The Hitchhiker's Guide to the Galaxy
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Message 31975 - Posted: 2 Dec 2006, 23:00:42 UTC - in response to Message 31970.  

With regret, I\'ve turned on another screen saver. Somebody please post here when it\'s safe to run graphics again? I do enjoy the BOINC graphics.

There have been a lot of graphics-crashing in Rosetta lately. I suggest not using the graphics at all until it clears up. It\'s safest that way.



Think of it this way - Rosetta crunches faster with the graphics off :)
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Message 31976 - Posted: 2 Dec 2006, 23:24:51 UTC - in response to Message 31971.  

Hi, it looks a problem of not getting new application correctly. Does this still happen if you force a clean update to get the 5.41 application again?

It was actually a fresh install to begin with, but so far the 2 current WUs have been going for several hours without any problems.

I was wrong. It just crashed on another WU again. Will try re-attaching to see if it helps.
"In the beginning the universe was created. This made a lot of people very angry and is widely considered as a bad move." - The Hitchhiker's Guide to the Galaxy
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Message 31989 - Posted: 3 Dec 2006, 5:25:30 UTC - in response to Message 31976.  

The failure rate for the application 5.41 has been normal compared to the previous version. Hopefully re-attaching will help.
Hi, it looks a problem of not getting new application correctly. Does this still happen if you force a clean update to get the 5.41 application again?

It was actually a fresh install to begin with, but so far the 2 current WUs have been going for several hours without any problems.

I was wrong. It just crashed on another WU again. Will try re-attaching to see if it helps.


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Message 31990 - Posted: 3 Dec 2006, 5:46:35 UTC - in response to Message 31970.  

Thanks for your reporting and at least we confirm one more case that those error codes are somehow graphic-reltated.

I think you can always hit \"show graphics\" to look at the simulated protein move around whenever you want. As a project team member, I feel a little bit embasrassed to instruct users to turn off the screensaver because of these graphic problems. If anyone has any clue on what may go wrong and what may be done to improve, please let us know. I googled those error codes and it turned out the most revelant entires are all from different BOINC projects ( of course R@H is among them).

With regret, I\'ve turned on another screen saver. Somebody please post here when it\'s safe to run graphics again? I do enjoy the BOINC graphics.

There have been a lot of graphics-crashing in Rosetta lately. I suggest not using the graphics at all until it clears up. It\'s safest that way.



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Message 31991 - Posted: 3 Dec 2006, 6:09:52 UTC
Last modified: 3 Dec 2006, 6:10:23 UTC

The next one I ran after the failed one (On the same machine), Ran fine with the graphics off. I was afraid it was that graphics glitch again. Rosetta is the only project I run that I will turn the graphics on and leave (On my old machine), Just because I like to glance at it occasionally as it runs. I know it slows the time down on it, But when Im running Rosetta on my older p4 with ME. Speed is something lacking regardless LoL.. Plus, It looks good on the monitor in the background. :)
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Message 31998 - Posted: 3 Dec 2006, 10:01:10 UTC - in response to Message 31989.  

The failure rate for the application 5.41 has been normal compared to the previous version. Hopefully re-attaching will help.
It didn\'t. More WUs crashed throughout the night. I\'ll now have to detach from Rosetta@Home and attach another project to it.

"In the beginning the universe was created. This made a lot of people very angry and is widely considered as a bad move." - The Hitchhiker's Guide to the Galaxy
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Message 32005 - Posted: 3 Dec 2006, 14:02:02 UTC

can anyone tell me why i got all these errors???????????????/
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Message boards : Number crunching : Problems with Rosetta version 5.41



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