Report Errors for Rosetta Version 5.06

Message boards : Number crunching : Report Errors for Rosetta Version 5.06

To post messages, you must log in.

1 · 2 · Next

AuthorMessage
Moderator9
Volunteer moderator
Project administrator

Send message
Joined: 22 Jan 06
Posts: 1014
Credit: 0
RAC: 0
Message 14813 - Posted: 28 Apr 2006, 2:21:36 UTC

This thread is for reporting errors relating to Version 5.06 released 4/27/06.

Please proved links to any Work Unit results related to the errors.

Remember dome of the Work Units being run are in preparation for the Upcoming CASP. They may be quite large so please do not be too quick to abort them.

There is more information in post about the new application, and some of it\'s features.

Moderator9
ROSETTA@home FAQ
Moderator Contact
ID: 14813 · Rating: 1 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile Hoelder1in
Avatar

Send message
Joined: 30 Sep 05
Posts: 169
Credit: 3,910,927
RAC: 0
Message 14838 - Posted: 28 Apr 2006, 8:28:52 UTC
Last modified: 28 Apr 2006, 9:07:00 UTC

All my v5.06 WUs are failing with exit code 2 ! See here. I am away from my computer right now, so I can\'t tell you anything more than that (there were no problems with the v5.06 WUs that I crunched on Ralph).

UPDATE: All the ones sent before 7:46 UTC crashed immediately; this one seems to be doing ok so far.
Team betterhumans.com - discuss and celebrate the future - hoelder1in.org
ID: 14838 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Jose

Send message
Joined: 28 Mar 06
Posts: 820
Credit: 48,297
RAC: 0
Message 14870 - Posted: 28 Apr 2006, 13:55:49 UTC

Another error, this time with another type of WU

6- http://boinc.bakerlab.org/rosetta/result.php?resultid=18465626
Result ID 18465626
Name PROD_ABINITIO_9FULLSTRANDBAR_1tul__447_97346_0
Workunit 15246772
Created 28 Apr 2006 0:39:35 UTC
Sent 28 Apr 2006 5:06:49 UTC
Received 28 Apr 2006 13:48:47 UTC
Exit status -1073741819 (0xc0000005)
Report deadline 12 May 2006 5:06:49 UTC
CPU time 9071.359375
stderr out <core_client_version>5.2.13</core_client_version>
<message> - exit code -1073741819 (0xc0000005)
</message>
<stderr_txt>
# random seed: 2542715
# cpu_run_time_pref: 14400
LoadLibraryA( symsrv.dll ): GetLastError = 126
LoadLibraryA( srcsrv.dll ): GetLastError = 126

Once the whole workload I have in the queque ends, I will reduce my cpu time from 4 to 2 and see if that changes the error situation.

This and no other is the root from which a Tyrant springs; when he first appears he is a protector.”
Plato
ID: 14870 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Moderator9
Volunteer moderator
Project administrator

Send message
Joined: 22 Jan 06
Posts: 1014
Credit: 0
RAC: 0
Message 14879 - Posted: 28 Apr 2006, 15:19:58 UTC
Last modified: 28 Apr 2006, 15:37:10 UTC

All of the discussion and help being offered to Jose is useful and welcome, and I encourage you to continue. But if you don\'t mind I would like to move the posts and the discussion to another thread so the error reports will stand out for the project team. The posts and the discussion can be found Here.
Moderator9
ROSETTA@home FAQ
Moderator Contact
ID: 14879 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Mikkie

Send message
Joined: 1 Apr 06
Posts: 9
Credit: 5,700
RAC: 0
Message 14884 - Posted: 28 Apr 2006, 16:37:05 UTC

2006-04-28 18:30:11 [rosetta@home] Unrecoverable error for result AB_CASP6_t212__458_6530_0 ( - exit code -1073741811 (0xc000000d))

Result ID 18505404
Name AB_CASP6_t212__458_6530_0
Workunit 15281577
Created 28 Apr 2006 9:57:17 UTC
Sent 28 Apr 2006 13:56:17 UTC
Received 28 Apr 2006 16:33:00 UTC
Server state Over
Outcome Client error
Client state Computing
Exit status -1073741811 (0xc000000d)
Report deadline 12 May 2006 13:56:17 UTC
CPU time 3276.296875
stderr out

<core_client_version>5.2.13</core_client_version>
<message> - exit code -1073741811 (0xc000000d)
</message>
<stderr_txt>
# cpu_run_time_pref: 7200
# random seed: 2190971
# cpu_run_time_pref: 7200
# random seed: 2190971

</stderr_txt>

Validate state Invalid
Claimed credit 14.64245394668
Granted credit 0
application version 5.06
ID: 14884 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Jimi@0wned.org.uk

Send message
Joined: 10 Mar 06
Posts: 29
Credit: 335,252
RAC: 0
Message 14887 - Posted: 28 Apr 2006, 16:44:21 UTC

My WUs are set to run 4 hours, generally they finish in around 14,000 seconds of CPU time. However, the first two 5.06 WUs I\'ve had have finished in 3,400 and 7,800 seconds CPU respectively. Is this a bug?
ID: 14887 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile Feet1st
Avatar

Send message
Joined: 30 Dec 05
Posts: 1740
Credit: 2,832,998
RAC: 1,086
Message 14889 - Posted: 28 Apr 2006, 16:48:59 UTC - in response to Message 14887.  

My WUs are set to run 4 hours, generally they finish in around 14,000 seconds of CPU time. However, the first two 5.06 WUs I\'ve had have finished in 3,400 and 7,800 seconds CPU respectively. Is this a bug?

Jimi has several computers, appears he\'s talking about these two WUs:
Result 18502699 and result 18487312
If having a DC project with BOINC is of interest to you, with volunteer or cloud computing resources, but have no time for the BOINC learning curve,
use a hosting service that understands BOINC projects: http://DeepSci.com
ID: 14889 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
cMw

Send message
Joined: 24 Apr 06
Posts: 9
Credit: 14,036
RAC: 0
Message 14891 - Posted: 28 Apr 2006, 16:52:12 UTC

18452334 14066350 28 Apr 2006 1:56:16 UTC 28 Apr 2006 13:04:26 UTC Over Client error Computing 31,088.00 276.02 ---

thats on my acct after i woke up next morning to see that i had lost 8 hours worth of credit because of some computing error...i honestly think i should get credit for this my rac just dropped by 25 because of this
ID: 14891 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Moderator9
Volunteer moderator
Project administrator

Send message
Joined: 22 Jan 06
Posts: 1014
Credit: 0
RAC: 0
Message 14901 - Posted: 28 Apr 2006, 18:37:43 UTC

Help has arrived.

Version 5.06 has been released, This should put an end to the hangs and long run times that have been a problem to many of you reporting.

Please do not abort your current 5.01 Work Units if they are runing well. The science from them is still important to the project. If a Work Unit has run longer than 4 times your preferences \"Time\" setting, then it should be aborted.

Many of you have asked if credit will be awarded for these failed Work units, and the answer is YES. The credit is awarded on Fridays for failed Work Units.

For errors resulting from Rosetta Version 5.01, continue to report here.
For errors relating to Rosetta Version 5.06 report here in this thread

For information on the new Version and what it is supposed to do see this post.
For a message from Dr. Baker about the work unit runs in preparation for CASP see his journal entry here.

Moderator9
ROSETTA@home FAQ
Moderator Contact
ID: 14901 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
cMw

Send message
Joined: 24 Apr 06
Posts: 9
Credit: 14,036
RAC: 0
Message 14914 - Posted: 28 Apr 2006, 20:38:11 UTC - in response to Message 14901.  

Help has arrived.

Version 5.06 has been released, This should put an end to the hangs and long run times that have been a problem to many of you reporting.

Please do not abort your current 5.01 Work Units if they are runing well. The science from them is still important to the project. If a Work Unit has run longer than 4 times your preferences \"Time\" setting, then it should be aborted.

Many of you have asked if credit will be awarded for these failed Work units, and the answer is YES. The credit is awarded on Fridays for failed Work Units.

For errors resulting from Rosetta Version 5.01, continue to report here.
For errors relating to Rosetta Version 5.06 report here in this thread

For information on the new Version and what it is supposed to do see this post.
For a message from Dr. Baker about the work unit runs in preparation for CASP see his journal entry here.

ty now please release the fix :/
ID: 14914 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Hassan

Send message
Joined: 7 Mar 06
Posts: 4
Credit: 750,146
RAC: 0
Message 14970 - Posted: 29 Apr 2006, 8:15:20 UTC
Last modified: 29 Apr 2006, 8:16:12 UTC

Result ID 18122796
Name HBLR_1.0_1dtj_420_3452_3
Workunit 13389346
Created 24 Apr 2006 15:15:38 UTC
Sent 24 Apr 2006 20:33:06 UTC
Received 27 Apr 2006 5:24:19 UTC
Server state Over
Outcome Client error
Client state Computing
Exit status -177 (0xffffff4f)
Computer ID 175797
Report deadline 8 May 2006 20:33:06 UTC
CPU time 130784.75
stderr out <core_client_version>5.2.13</core_client_version>
<message>Maximum CPU time exceeded
</message>
<stderr_txt>
# random seed: 1597253
# cpu_run_time_pref: 7200
# random seed: 1597253
# random seed: 1597253

</stderr_txt>


Validate state Invalid
Claimed credit 1165.54456988046
Granted credit 300
application version 5.01

I see you did indeed grant me credit but why only 300, in the forums you said these are long and to let them run so I did for almost forty hours, then it auto aborts? So I guess what this means is that if any wu runs overs my projected time I will manually abort it so i don\'t lose credit when I put in the time.
ID: 14970 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Jose

Send message
Joined: 28 Mar 06
Posts: 820
Credit: 48,297
RAC: 0
Message 14971 - Posted: 29 Apr 2006, 8:38:04 UTC
Last modified: 29 Apr 2006, 8:38:31 UTC

http://boinc.bakerlab.org/rosetta/result.php?resultid=18541190

I went the one hour way as suggested and still after a series of successes this error cropped up. Yes it is one of those 107 type errors.

I will soon be running 5.07 units lets see what happens then.
This and no other is the root from which a Tyrant springs; when he first appears he is a protector.”
Plato
ID: 14971 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
K1100LTSE
Avatar

Send message
Joined: 28 Feb 06
Posts: 7
Credit: 192,387
RAC: 0
Message 14975 - Posted: 29 Apr 2006, 10:09:45 UTC

abort bei gui
1.24,34 hour
1.04%
--------------------
Result ID 18531724
Name AB_CASP6_t216__458_9817_0
Workunit 15304587
Created 28 Apr 2006 15:33:14 UTC
Sent 28 Apr 2006 19:28:26 UTC
Received 29 Apr 2006 9:02:56 UTC
Server state Over
Outcome Client error
Client state Computing
Exit status -197 (0xffffff3b)
Computer ID 193286
Report deadline 12 May 2006 19:28:26 UTC
CPU time 5074.59375
stderr out <core_client_version>5.4.6</core_client_version>
<message>
aborted by user
</message>
<stderr_txt>
# random seed: 2177684
# cpu_run_time_pref: 10800

</stderr_txt>


Validate state Invalid
Claimed credit 7.31035257340432
Granted credit 0
application version 5.06

ID: 14975 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
tralala

Send message
Joined: 8 Apr 06
Posts: 376
Credit: 581,806
RAC: 0
Message 14979 - Posted: 29 Apr 2006, 11:08:42 UTC - in response to Message 14975.  

abort bei gui
1.24,34 hour
1.04%
--------------------
Result ID 18531724
Name AB_CASP6_t216__458_9817_0

This was premature. The t216 protein is very large and needs more than one hour to complete one decoy. App 5.06 or 5.07 should abort it if it got stuck.
ID: 14979 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Jose

Send message
Joined: 28 Mar 06
Posts: 820
Credit: 48,297
RAC: 0
Message 14986 - Posted: 29 Apr 2006, 12:25:26 UTC
Last modified: 29 Apr 2006, 12:25:40 UTC

Another 5.06 computation error of the \"107 type\" http://boinc.bakerlab.org/rosetta/result.php?resultid=18542279


This and no other is the root from which a Tyrant springs; when he first appears he is a protector.”
Plato
ID: 14986 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Moderator9
Volunteer moderator
Project administrator

Send message
Joined: 22 Jan 06
Posts: 1014
Credit: 0
RAC: 0
Message 14988 - Posted: 29 Apr 2006, 12:37:43 UTC - in response to Message 14986.  

Another 5.06 computation error of the \"107 type\" http://boinc.bakerlab.org/rosetta/result.php?resultid=18542279


Jose:

Just looking at the size of your queue for one machine, you are likely to see a lot more of these before you start seeing the results of the 5.07 application. Are you on a modem? Is there some particular reason you are running the large queues?

The reason I ask is that in the few instances that 5.07 has run on your system it seems to have fixed the issues. Just as a suggestion (assuming you have DSL or something other than dial up) you might want to run smaller queues for a while just to see how things are going. Then if everything seems to be working, you could ramp up. Just my 2 cents

Moderator9
ROSETTA@home FAQ
Moderator Contact
ID: 14988 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Jose

Send message
Joined: 28 Mar 06
Posts: 820
Credit: 48,297
RAC: 0
Message 14995 - Posted: 29 Apr 2006, 13:31:50 UTC - in response to Message 14988.  
Last modified: 29 Apr 2006, 14:28:42 UTC

Jose:

Just as a suggestion (assuming you have DSL or something other than dial up) you might want to run smaller queues for a while just to see how things are going. Then if everything seems to be working, you could ramp up. Just my 2 cents
[/quote]


Argh!!!! TY for pointing the queque thing. Drat..I swear I had placed a 1. Probably did and forgot to save the change(Insert blushing emotie ). I will correct that pronto.

MY ISP is going to be running maintenance today. I just wanted my computer to have units to work with just in case I get disconnected for a large amount of time ( Given my ISP record , that is a possibility)

This and no other is the root from which a Tyrant springs; when he first appears he is a protector.”
Plato
ID: 14995 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Paul

Send message
Joined: 6 Jun 06
Posts: 2
Credit: 476
RAC: 0
Message 18128 - Posted: 8 Jun 2006, 14:32:29 UTC

Hello,
I am running rosetta on a system I have in the window of my store. It\'s a dual-core 4200+ AMD with 2 gigs of DDR RAM and it keeps erroring out. I am running the same software (latest version) on my own desktop in my store and never have gotten one error. Black screens, freeze ups, etc.. last one did give me a \"report to Billy Gates\" message. It goes as follows:

Unrecoverable error for result t306_CASP7_ABRELAX_SAVE_ALL_OUT_homo020_646_657_0(-exit code-1073741811(0xc000000d)

No clue what this means, but this software is the only thing on this systems gives errors.

System:
amd 4200+ dual-core
300GB maxtor hd (ide)
2GB 400mhz ddr
asus a8n5x motherboard (with nvidia chipset)
x800 video card with 256mb onboard ram
650watt power supply
wintv tv tuner card
windows xp profesional SP2

Any clue to what is happening?









ID: 18128 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Profile David Emigh
Avatar

Send message
Joined: 13 Mar 06
Posts: 158
Credit: 417,178
RAC: 0
Message 18129 - Posted: 8 Jun 2006, 14:45:15 UTC

Hey Paul :D

I notice that you posted the problem in the thread <Report Errors for Rosetta Version 5.06>

Was that an oversight or is the computer in question actually running that version? The latest is v5.16, so it would be an easy mistake.

If by some fluke that computer is actually running v5.06, the first thing I would suggest would be to update.
Rosie, Rosie, she's our gal,
If she can't do it, no one shall!
ID: 18129 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Paul

Send message
Joined: 6 Jun 06
Posts: 2
Credit: 476
RAC: 0
Message 18131 - Posted: 8 Jun 2006, 14:54:34 UTC - in response to Message 18129.  

Yeah..I am at work and not watching what I\'m doing..sorry. I click a link for a support forum and it gave me this one. Sorry folks. I\'ll look again.
ID: 18131 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
1 · 2 · Next

Message boards : Number crunching : Report Errors for Rosetta Version 5.06



©2017 University of Washington
http://www.bakerlab.org