Error - The sequence position requested was greater than the number of residues in the pose.

Message boards : Number crunching : Error - The sequence position requested was greater than the number of residues in the pose.

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freecompute

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Joined: 11 Jul 21
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Message 102540 - Posted: 4 Sep 2021, 16:00:37 UTC

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<message>
Incorrect function.
(0x1) - exit code 1 (0x1)</message>
<stderr_txt>
command: projects/boinc.bakerlab.org_rosetta/rosetta_4.20_windows_x86_64.exe -run:protocol jd2_scripting -parser:protocol pdblite_boinc_120_10_tfirst--fuse--predictor_v13_degrader_boinc--fuse--tslp_design_v2_degrader_boinc.xml @degrader_site_5nvx_jhr_bcov_flags2 -in:file:silent degrader_site_5nvx_jhr_bcov3_SAVE_ALL_OUT_IGNORE_THE_REST_6xk1tz4e.silent -in:file:silent_struct_type binary -silent_gz -mute all -silent_read_through_errors true -out:file:silent_struct_type binary -out:file:silent default.out -in:file:boinc_wu_zip degrader_site_5nvx_jhr_bcov3_SAVE_ALL_OUT_IGNORE_THE_REST_6xk1tz4e.zip @degrader_site_5nvx_jhr_bcov3_SAVE_ALL_OUT_IGNORE_THE_REST_6xk1tz4e.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 3208205
Using database: database_357d5d93529_n_methylminirosetta_database

ERROR: Error in core::conformation::Conformation::residue(): The sequence position requested was greater than the number of residues in the pose.
ERROR:: Exit from: C:cygwin64homeboinc4.17Rosettamainsourcesrccore/conformation/Conformation.hh line: 508
BOINC:: Error reading and gzipping output datafile: default.out
01:22:34 (4876): called boinc_finish(1)

</stderr_txt>
]]>


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I've had 10 tasks end in errors because of this. Does anyone have a solution?
ID: 102540 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote
Falconet

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Message 102541 - Posted: 4 Sep 2021, 16:07:03 UTC - in response to Message 102540.  

Nothing you can do.
It's not a problem with your device.
ID: 102541 · Rating: 0 · rate: Rate + / Rate - Report as offensive    Reply Quote

Message boards : Number crunching : Error - The sequence position requested was greater than the number of residues in the pose.



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