Rosetta's role in fighting coronavirus

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Jim1348

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Message 92064 - Posted: 18 Mar 2020, 20:14:45 UTC - in response to Message 92063.  
Last modified: 18 Mar 2020, 20:18:23 UTC

The Review you linked was indeed written by some of the OpenZika Researchers but it has nothing to do with WCG.

I think that was a rather artful way of stating it.
Since the WCG projects are conducted by scientists, and since he was, and potentially is, a scientist working on a WCG project, then if he indicates there is a possibility for more WCG work, then there is.
QED
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Falconet

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Message 92066 - Posted: 18 Mar 2020, 20:18:13 UTC - in response to Message 92064.  
Last modified: 18 Mar 2020, 20:22:14 UTC

They might run a new project in the future, but that was not the interpretation I made from the Review.
They speak about lessons learned from the OpenZika project regarding the computations, targets and libraries of compounds, etc but nothing about running anything at WCG in the future.
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Jim1348

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Message 92068 - Posted: 18 Mar 2020, 20:30:30 UTC - in response to Message 92066.  
Last modified: 18 Mar 2020, 20:35:26 UTC

I don't think he was stating there would necessarily be more work either, but it looked like a possible future direction to me.

EDIT: But what I found more curious was the need by WCG to distance themselves from that possibility. I guess they just don't want their hands tied, or any implication of their future work. OK, fair enough if that is what they want.
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Falconet

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Message 92069 - Posted: 18 Mar 2020, 20:36:11 UTC - in response to Message 92068.  
Last modified: 18 Mar 2020, 20:39:03 UTC

The whole point of the review seemed to me like a proposal to a Vina-based OpenSARS-Cov-2 project, yes I agree! But not necessarily run on WCG (they speak about reduced targets and compound libraries maybe small enough to be computed internally).

We'll see.
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sfobrian

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Message 92095 - Posted: 20 Mar 2020, 0:17:04 UTC - in response to Message 92010.  
Last modified: 20 Mar 2020, 0:18:02 UTC

Don't request tasks for NVIDIA GPU
Project has no apps for NVIDIA GPU

Is this CPU only?


Yeah, I ran into this too and banged my head against a wall too long until I figured out. why Rosetta wasn't using my GPUs..

However, since F@H appears to support GPU folding for their COVID efforts, I run BOINC on my CPUs for Rosetta@Home, and F@H on only a GPU slot for their folding projects so they don't interfere with each other. However, F@H is so overwhelmed with new volunteers right now, they're frequently running out of Work Units, or otherwise have some server-side delays in getting enough work out to the idle GPU workers (at least from what I understand from their posts).


A heads-up before any Mac users get excited: the MacOS F@H client does NOT support GPU folding. If you have a supported GPU, you will need to use Bootcamp to run the Windows or Linux F@H client in order to do GPU folding on your Mac (hardware) to help with COVID-19.

Otherwise if you really want to put your GPU to use, you can try tweaking AnonymousPryme's script and use BOINC on your GPU for a different project (that uses GPUs) and CPU for Rosetta/COVID-19.
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John Twohy

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Message 92097 - Posted: 20 Mar 2020, 2:56:57 UTC - in response to Message 92095.  

will get to be the largest cluster computer in the world like it was a decade ago.
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rdea

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Message 92101 - Posted: 20 Mar 2020, 18:25:05 UTC

All my cpu from Spain with the project. Go!
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John Twohy

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Message 92102 - Posted: 20 Mar 2020, 18:33:55 UTC - in response to Message 92101.  

for time on GPU's use GPUGRID
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John Twohy

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Message 92103 - Posted: 20 Mar 2020, 18:43:11 UTC - in response to Message 92095.  
Last modified: 20 Mar 2020, 18:44:45 UTC

F@H it gives no hash points might be a (bitcoin miner) screen saver doesn't work. and is independent software not in the list of boinc links. https://www.bleepingcomputer.com/news/security/redline-info-stealing-malware-spread-by-folding-home-phishing/?fbclid=IwAR0knzCKOHKtXMqiAQV1_FYppv0iOhKI8RuxGkQvb_w7DJL0cBiooEeBVJc#.XnPOybn_1k4.facebook
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rdea

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Message 92104 - Posted: 20 Mar 2020, 20:55:43 UTC - in response to Message 92102.  

Thanks, I will put the equipment that I have with GPU as you tell me.
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Tim Taylor

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Message 92106 - Posted: 20 Mar 2020, 21:44:11 UTC

Joining in from London on both my macs! Also running Folding@home too.
Glad to help.
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Guillaume Van Hemmen

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Message 92109 - Posted: 21 Mar 2020, 8:35:07 UTC

joining the fight with my 4 MBP ;)
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Profile [VENETO] boboviz

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Message 92111 - Posted: 21 Mar 2020, 9:20:08 UTC

Welcome to all new members!!
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Dotsch
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Message 92115 - Posted: 21 Mar 2020, 18:46:01 UTC

From the form post and tweets, for me the situation relating COVID-19 work is not clear.
Is there in the moment any COVID-19 related work in progress?
What exactlly will be processed by Rosetta?
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Ivailo Bonev

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Message 92117 - Posted: 22 Mar 2020, 0:42:37 UTC
Last modified: 22 Mar 2020, 0:54:48 UTC

Here we go, my first unit for COVID-19 related research!

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Discarded

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Message 92118 - Posted: 22 Mar 2020, 3:47:21 UTC
Last modified: 22 Mar 2020, 3:48:04 UTC

They seems to be aware of recent increase in volunteers concerned about the coronavirus outbreak.
I can see a few of workunits have literal "COVID-19" text string in the name, and "SAVE_ALL_OUT" suffix to every single one of them including non-covid WUs.
I believe at least it will help us keeping adequate amount of hopes, so that we don't lose our sanity by unbearable fear.
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test

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Message 92125 - Posted: 22 Mar 2020, 11:19:45 UTC

As team founder, I would like to join the project so that my volunteers can participate in the fight against the COVID19. Do any of the project Admins have any idea how long it will take to research this? Will the supply of WU's be spread over days, weeks or months? Just to get an idea. Thanks for your reply.
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BORG315

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Message 92127 - Posted: 22 Mar 2020, 13:54:39 UTC - in response to Message 91772.  

Are we still running models to help fight corona?
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shadzofsilver

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Message 92128 - Posted: 22 Mar 2020, 15:42:25 UTC - in response to Message 92127.  

Yes. I have a few work units with "COVID-19" in their name.
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torma99

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Message 92131 - Posted: 22 Mar 2020, 16:32:24 UTC - in response to Message 92127.  

My computer also crunches a covid work unit right now.
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Message boards : News : Rosetta's role in fighting coronavirus



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