Posts by Billy

1) Message boards : Number crunching : New kind of app on Ralph (Message 102056)
Posted 11 Jun 2021 by Billy
Post:
On my old iMac, I had 2 of these running at once with 2 regular Rosetta tasks. These new ones take up a lot of memory. As long as I was away for the day and the computer wasn't touched, they ran to completion. I had 2 others running at the same time and when I started to look at videos and do my email they sort of choked on the memory constraints and stopped themselves with an error message on Boinc Manager. When I shut everything off and restarted the computer to get them going again, they appeared to attempt to restart but failed. I don't remember now what happened after that.
2) Message boards : Number crunching : New kind of app on Ralph (Message 101956)
Posted 29 May 2021 by Billy
Post:
Got my first small r "rosetta python projects 1.01" today. Boinc Manager says that it will take an estimated 6:12:31 to complete.
3) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 96612)
Posted 18 May 2020 by Billy
Post:
WU -- Junior_HalfRoid_design6_cart_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_3cm6ew0f_929582_4

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)</message>
<stderr_txt>
command: rosetta_4.20_x86_64-apple-darwin -run:protocol jd2_scripting -parser:protocol jhr_boinc_v4_cart.xml @flags -in:file:silent Junior_HalfRoid_design6_cart_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_3cm6ew0f.silent -in:file:silent_struct_type binary -silent_gz -mute all -silent_read_through_errors true -out:file:silent_struct_type binary -out:file:silent default.out -in:file:boinc_wu_zip Junior_HalfRoid_design6_cart_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_3cm6ew0f.zip @Junior_HalfRoid_design6_cart_COVID-19_SAVE_ALL_OUT_IGNORE_THE_REST_3cm6ew0f.flags -nstruct 10000 -cpu_run_time 28800 -boinc:max_nstruct 20000 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -boinc::cpu_run_timeout 36000 -run::rng mt19937 -constant_seed -jran 1889263
Using database: database_357d5d93529_n_methyl/minirosetta_database

ERROR: [ERROR] Unable to open constraints file: 661878b62a16b66dd9a610e0aacf01c4_n0_c1_1_0001.MSAcst
ERROR:: Exit from: src/core/scoring/constraints/ConstraintIO.cc line: 457
BOINC:: Error reading and gzipping output datafile: default.out
11:40:10 (9714): called boinc_finish(1)
4) Message boards : Number crunching : Rosetta 4.1+ and 4.2+ (Message 95896)
Posted 3 May 2020 by Billy
Post:
I am getting a few Tasks with this type of error, but they validate and Outcome is Success. Running on Mac. Task 1168032844

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
ing freed was not allocated
*** set a breakpoint in malloc_error_break to debug
rosetta_4.20_x86_64-apple-darwin(71802,0x7fffa915f3c0) malloc: *** error for object 0x112ed70c0: pointer being freed was not allocated
*** set a breakpoint in malloc_error_break to debug
rosetta_4.20_x86_64-apple-darwin(71802,0x7fffa915f3c0) malloc: *** error for object 0x112ed70c0: pointer being freed was not allocated
*** set a breakpoint in malloc_error_break to debug
rosetta_4.20_x86_64-apple-darwin(71802,0x7fffa915f3c0) malloc: *** error for object 0x112ed70c0: pointer being freed was not allocated
*** set a breakpoint in malloc_error_break to debug
5) Message boards : Number crunching : Validate Errors (Message 76823)
Posted 11 Jun 2014 by Billy
Post:
On June 7, I received "validate errors" on several tasks. These tasks were derived from other computers reporting "detached" and "aborted". The tasks as a result had "too many error results" and "too many total results". An example task is here

Also, in the task description there is credit given for the task, but in the summary for the computer there is no credit given and on Boincstats, I received no credit for these tasks.

Hopefully that URL works now.here. And I should have said "work unit" not task, I think.
6) Message boards : Number crunching : Validate Errors (Message 76820)
Posted 10 Jun 2014 by Billy
Post:
On June 7, I received "validate errors" on several tasks. These tasks were derived from other computers reporting "detached" and "aborted". The tasks as a result had "too many error results" and "too many total results". An example task is here

Also, in the task description there is credit given for the task, but in the summary for the computer there is no credit given and on Boincstats, I received no credit for these tasks.
7) Message boards : Number crunching : Validate errors (Message 76595)
Posted 7 Apr 2014 by Billy
Post:
Same here. Mac OSX 10.7.5 Boinc Manager 7.3.13

Billy
8) Message boards : Number crunching : Minirosetta 1.82/1.88 (Message 62233)
Posted 15 Jul 2009 by Billy
Post:
Task 1554305

BOINC:: Worker startup.
Starting watchdog...
Watchdog active.
Starting work on structure: _1BG2A_2_00001
BOINC:: CPU time: 18235.1s, 14400s + 3600s[2009- 7-14 19:26:21:] :: BOINC
WARNING! cannot get file size for default.out.gz: could not open file.
Output exists: default.out.gz Size: -1
InternalDecoyCount: 0 (GZ)
-----
0
-----
Stream information inconsistent.
Writing W_0000001

Minirosetta 1.82
9) Message boards : Number crunching : Resource Share Obsolete? (Message 60806)
Posted 24 Apr 2009 by Billy
Post:
Since RS seems to be completely useless in regulating computer assignments for Boinc Projects, i.e. On Rosetta, I have RS set to 1%, yet I get continuous downloading and running at "high priority". I wind up setting tasks to "suspend" or "abort" and setting many projects to "no new tasks" to control the flow of work. I have only one computer with 1 CPU and am connected to several projects; one of the unusual setups.
10) Message boards : Number crunching : Problems with Rosetta version 5.45 (Message 35776)
Posted 30 Jan 2007 by Billy
Post:
Everything is running fine with iMac4,1 Core Duo and Boinc Manager 5.4.9.

Not sure if this is a minor bug as I don't run Rosetta much. If I have the graphics window running and switch to another program, all is well. If I click on the graphics window, the window comes to the front as it should, but the menus stay with the other program, not Boinc. If I am in the other program and switch to Boinc, the graphics window closes.
11) Message boards : Number crunching : Report Problems with Rosetta Version 5.22 (Message 18569)
Posted 13 Jun 2006 by Billy
Post:
I had a work unit processing at about 80% complete and it seemed to be going normally. I suspended the project (as well as Einstein and Seti) and quit Boinc. I shutdown the computer and restarted. When Boinc started again, it reported this work unit as complete and uploaded it. Either it was stuck before or isn't actually complete. I had a similar thing happen a couple of days ago and it also reported work units complete even though the completion times were unusually short.

http://boinc.bakerlab.org/rosetta/result.php?resultid=23946621

iMac Core Duo, Rosetta version 5.22
12) Questions and Answers : Macintosh : 'i686-apple-darwin' not found (Message 18544)
Posted 13 Jun 2006 by Billy
Post:
It is running okay on my iMac Core Duo along with Seti and Einstein as intel-native. I am getting results of around 21000 CPUsec. per WU. http://boinc.bakerlab.org/rosetta/results.php?userid=85245 Is this good, bad, average?
13) Message boards : Number crunching : Rosetta for Intel Mac Mini? (Message 18181)
Posted 8 Jun 2006 by Billy
Post:
Actually, Boinc just downloaded version Rosetta 5.22 to my iMac Core Duo for Rosetta. The worker is rosetta_5.22_i686-apple-darwin. There were also a ton of other files downloaded.






©2022 University of Washington
https://www.bakerlab.org