Posts by Ray Forma

1) Questions and Answers : Macintosh : rosetta screensaver (Message 87825)
Posted 5 Dec 2017 by Profile Ray Forma
Post:
Since installing BOINC Manager 7.8.4 on my Mac I find the kernel_task using 70 to 71% of CPU capacity instead of its normal 1%. Quitting BOINC manager returns kernel_task usage to normal.

The only Project I'm running is Rosetta@home, limited to 3 processors. If I suspend the Project the processes don't stop, and the kernel_task still runs at 70%.

Quitting BOINC and relaunching it with the Project suspended sees kernel_task running at normal low levels. Un-suspending the Rosetta@home Process sees kernel_task again running at 70%.

Is this a BOINC problem, a Rosetta@home problem, or a local problem?

BOINC Manager event log:
Tue 5 Dec 10:27:33 2017 | | cc_config.xml not found - using defaults
Tue 5 Dec 10:27:33 2017 | | Starting BOINC client version 7.8.4 for x86_64-apple-darwin
Tue 5 Dec 10:27:33 2017 | | log flags: file_xfer, sched_ops, task
Tue 5 Dec 10:27:33 2017 | | Libraries: libcurl/7.50.2 OpenSSL/1.1.0 zlib/1.2.5 c-ares/1.11.0
Tue 5 Dec 10:27:33 2017 | | Data directory: /Library/Application Support/BOINC Data
Tue 5 Dec 10:27:33 2017 | | OpenCL: AMD/ATI GPU 0: ATI Radeon HD 5770 (driver version 1.2 (Jun 4 2017 22:35:26), device version OpenCL 1.2, 1024MB, 1024MB available, 680 GFLOPS peak)
Tue 5 Dec 10:27:33 2017 | | OpenCL CPU: Intel(R) Xeon(R) CPU W3530 @ 2.80GHz (OpenCL driver vendor: Apple, driver version 1.1, device version OpenCL 1.2)
Tue 5 Dec 10:27:33 2017 | | Host name: MacPro.lan
Tue 5 Dec 10:27:33 2017 | | Processor: 8 GenuineIntel Intel(R) Xeon(R) CPU W3530 @ 2.80GHz [x86 Family 6 Model 26 Stepping 5]
Tue 5 Dec 10:27:33 2017 | | Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clfsh ds acpi mmx fxsr sse sse2 ss htt tm pbe pni dtes64 mon dscpl vmx est tm2 ssse3 cx16 tpr pdcm sse4_1 sse4_2 popcnt
Tue 5 Dec 10:27:33 2017 | | OS: Mac OS X 10.10.5 (Darwin 14.5.0)
Tue 5 Dec 10:27:33 2017 | | Memory: 16.00 GB physical, 69.24 GB virtual
Tue 5 Dec 10:27:33 2017 | | Disk: 232.09 GB total, 69.00 GB free
Tue 5 Dec 10:27:33 2017 | | Local time is UTC +8 hours
Tue 5 Dec 10:27:33 2017 | Rosetta@home | URL http://boinc.bakerlab.org/rosetta/; Computer ID 3123581; resource share 100
Tue 5 Dec 10:27:33 2017 | | General prefs: from http://einstein.phys.uwm.edu/ (last modified 21-Jun-2011 10:20:55)
Tue 5 Dec 10:27:33 2017 | | Host location: none
Tue 5 Dec 10:27:33 2017 | | General prefs: using your defaults
Tue 5 Dec 10:27:33 2017 | | Reading preferences override file
Tue 5 Dec 10:27:33 2017 | | Preferences:
Tue 5 Dec 10:27:33 2017 | | max memory usage when active: 16384.00 MB
Tue 5 Dec 10:27:33 2017 | | max memory usage when idle: 16384.00 MB
Tue 5 Dec 10:27:33 2017 | | max disk usage: 4.00 GB
Tue 5 Dec 10:27:33 2017 | | max CPUs used: 3
Tue 5 Dec 10:27:33 2017 | | don't use GPU while active
Tue 5 Dec 10:27:33 2017 | | suspend work if non-BOINC CPU load exceeds 20%
Tue 5 Dec 10:27:33 2017 | | (to change preferences, visit a project web site or select Preferences in the Manager)
Tue 5 Dec 10:27:33 2017 | | Suspending GPU computation - computer is in use
Tue 5 Dec 10:32:25 2017 | Rosetta@home | project resumed by user
Tue 5 Dec 10:32:35 2017 | | Suspending computation - CPU is busy
Tue 5 Dec 10:32:45 2017 | | Resuming computation

Extract from Activity Monitor:
minirosetta_3.78_x86_64-apple-darwin 99.9 33:26.01 3 7 484 boinc_project 0 bytes 0 bytes 64 bit 0 bytes 0 bytes 0 0 - No 0 bytes No 0 bytes 0 bytes 0 bytes 0 bytes No No 0 bytes
kernel_task 70.9 24:02.72 108 360 0 root 0 bytes 0 bytes 64 bit 0 bytes 0 bytes 0 0 - No 0 bytes No 0 bytes 0 bytes 0 bytes 0 bytes No No 0 bytes
minirosetta_3.78_x86_64-apple-darwin 46.7 15:41.93 2 8 486 boinc_project 0 bytes 0 bytes 64 bit 0 bytes 0 bytes 0 0 - No 0 bytes No 0 bytes 0 bytes 0 bytes 0 bytes No No 0 bytes
minirosetta_3.78_x86_64-apple-darwin 46.3 15:37.68 2 8 482 boinc_project 0 bytes 0 bytes 64 bit 0 bytes 0 bytes 0 0 - No 0 bytes No 0 bytes 0 bytes 0 bytes 0 bytes No No 0 bytes
2) Message boards : Number crunching : Mac Problems Delivering results (Message 69402)
Posted 18 Jan 2011 by Profile Ray Forma
Post:
Okay, I think I fixed this. It was totally my fault and I'm sorry. After looking into this issue, I realized that the scheduler binaries (which I had to recompile after the crash) was not from the same source as before the crash. I updated the binaries and they should now recognize the "alt_platform". Thanks for all your input on this issue.


Well done! My Mac (MacPro 5,1; 2.8GHz, MacOS 10.6.6) is happily crunching R@h again. Details (Times = UTC +8):

Mon 17 Jan 17:41:54 2011 rosetta@home Sending scheduler request: To fetch work.
Mon 17 Jan 17:41:54 2011 rosetta@home Requesting new tasks
Mon 17 Jan 17:42:02 2011 rosetta@home Scheduler request completed: got 1 new tasks
Tue 18 Jan 02:15:32 2011 rosetta@home Started download of minirosetta_database_rev39052.zip
Tue 18 Jan 02:30:20 2011 rosetta@home Started download of redo_targets_argn_noncoval_control_files3.zip
Tue 18 Jan 02:33:43 2011 rosetta@home Finished download of redo_targets_argn_noncoval_control_files3.zip
Tue 18 Jan 02:33:44 2011 rosetta@home Started download of minirosetta_2.17_i686-apple-darwin
Tue 18 Jan 02:43:02 2011 rosetta@home Finished download of minirosetta_2.17_i686-apple-darwin
Tue 18 Jan 02:43:40 2011 rosetta@home Finished download of minirosetta_database_rev39052.zip
Tue 18 Jan 02:43:46 2011 rosetta@home Starting argn_noncoval_redo_targets_CONTROL_SAVE_ALL_OUT_21967_5611_0
Tue 18 Jan 02:43:46 2011 rosetta@home Starting task argn_noncoval_redo_targets_CONTROL_SAVE_ALL_OUT_21967_5611_0 using minirosetta version 217
Tue 18 Jan 04:22:04 2011 rosetta@home Sending scheduler request: To fetch work.
Tue 18 Jan 04:22:04 2011 rosetta@home Requesting new tasks
Tue 18 Jan 04:22:11 2011 rosetta@home Scheduler request completed: got 1 new tasks
Tue 18 Jan 04:22:13 2011 rosetta@home Started download of 2icp.aahelix03_05.200_v1_3.gz
Tue 18 Jan 04:22:13 2011 rosetta@home Started download of 2icp.aahelix09_05.200_v1_3.gz
Tue 18 Jan 04:23:26 2011 rosetta@home Finished download of 2icp.aahelix03_05.200_v1_3.gz
Tue 18 Jan 04:23:26 2011 rosetta@home Started download of 2icp.native.pdb
Tue 18 Jan 04:23:32 2011 rosetta@home Finished download of 2icp.native.pdb
Tue 18 Jan 04:23:32 2011 rosetta@home Started download of helix.psipred_ss2.gz
Tue 18 Jan 04:23:33 2011 rosetta@home Finished download of helix.psipred_ss2.gz
Tue 18 Jan 04:24:14 2011 rosetta@home Finished download of 2icp.aahelix09_05.200_v1_3.gz
Tue 18 Jan 04:57:01 2011 rosetta@home Computation for task argn_noncoval_redo_targets_CONTROL_SAVE_ALL_OUT_21967_5611_0 finished
Tue 18 Jan 04:57:01 2011 rosetta@home Starting abrelax_helixfrag_2icp_SAVE_ALL_OUT_22843_17026_0
Tue 18 Jan 04:57:02 2011 rosetta@home Starting task abrelax_helixfrag_2icp_SAVE_ALL_OUT_22843_17026_0 using minirosetta version 217
Tue 18 Jan 04:57:03 2011 rosetta@home Started upload of argn_noncoval_redo_targets_CONTROL_SAVE_ALL_OUT_21967_5611_0_0
Tue 18 Jan 04:57:22 2011 rosetta@home Finished upload of argn_noncoval_redo_targets_CONTROL_SAVE_ALL_OUT_21967_5611_0_0
3) Message boards : Number crunching : Mac Problems Delivering results (Message 69383)
Posted 16 Jan 2011 by Profile Ray Forma
Post:
Did your 64bit Macs work with R@h before the disk failure? The server has not changed so I'm a bit puzzled. The client should just get the 32bit version. I'll look into adding the 64bit version soon regardless.


My setup worked well with R@h before the disk failure. Nothing has changed at my end since the last successfulk R@h task. As part of my initial trouble-shooting I reset the project, so can't quickly determine when the last R@h task was crunched here.
4) Message boards : Number crunching : Mac Problems Delivering results (Message 69366)
Posted 15 Jan 2011 by Profile Ray Forma
Post:
Same with me:

Sat 15 Jan 08:25:39 2011 Processor: 8 GenuineIntel Intel(R) Xeon(R) CPU W3530 @ 2.80GHz [x86 Family 6 Model 26 Stepping 5]
Sat 15 Jan 08:25:39 2011 Processor features: FPU VME DE PSE TSC MSR PAE MCE CX8 APIC SEP MTRR PGE MCA CMOV PAT PSE36 CLFSH DS ACPI MMX FXSR SSE SSE2 SS HTT TM SSE3 MON DSCPL VMX EST TM2 SSSE3 CX16 TPR PDCM SSE4.1 SSE4.2 POPCNT
Sat 15 Jan 08:25:39 2011 OS: Mac OS X 10.6.5 (Darwin 10.5.0)
Sat 15 Jan 08:25:39 2011 Memory: 7.00 GB physical, 501.63 GB virtual
Sat 15 Jan 08:25:39 2011 Disk: 931.19 GB total, 501.38 GB free
Sat 15 Jan 08:25:39 2011 Local time is UTC +8 hours
Sat 15 Jan 08:25:39 2011 No usable GPUs found
Sat 15 Jan 08:25:40 2011 rosetta@home URL http://boinc.bakerlab.org/rosetta/; Computer ID 1402444; resource share 100
Sat 15 Jan 08:25:40 2011 rosetta@home General prefs: from rosetta@home (last modified 14-Sep-2010 22:53:07)
Sat 15 Jan 08:25:40 2011 rosetta@home Computer location: home
Sat 15 Jan 08:25:40 2011 rosetta@home General prefs: no separate prefs for home; using your defaults
Sat 15 Jan 08:25:40 2011 Reading preferences override file
Sat 15 Jan 08:25:40 2011 Preferences:
Sat 15 Jan 08:25:40 2011 max memory usage when active: 3584.00MB
Sat 15 Jan 08:25:40 2011 max memory usage when idle: 6451.20MB
Sat 15 Jan 08:25:40 2011 max disk usage: 10.00GB
Sat 15 Jan 12:24:44 2011 rosetta@home Sending scheduler request: To fetch work.
Sat 15 Jan 12:24:44 2011 rosetta@home Requesting new tasks
Sat 15 Jan 12:24:47 2011 rosetta@home Scheduler request completed: got 0 new tasks
Sat 15 Jan 12:24:47 2011 rosetta@home Message from server: platform 'x86_64-apple-darwin' not found
5) Questions and Answers : Macintosh : strange error since crash (Message 69169)
Posted 11 Jan 2011 by Profile Ray Forma
Post:
Same problem here:
Tue 11 Jan 12:24:09 2011 rosetta@home update requested by user
Tue 11 Jan 12:24:11 2011 rosetta@home Sending scheduler request: Requested by user.
Tue 11 Jan 12:24:11 2011 rosetta@home Requesting new tasks
Tue 11 Jan 12:24:14 2011 rosetta@home Scheduler request completed: got 0 new tasks
Tue 11 Jan 12:24:14 2011 rosetta@home Message from server: platform 'x86_64-apple-darwin' not found
MacOS 10.6.5
Model Name: Mac Pro
Model Identifier: MacPro5,1
Processor Name: Quad-Core Intel Xeon
Processor Speed: 2.8 GHz
Number Of Processors: 1
Total Number Of Cores: 4
L2 Cache (per core): 256 KB
L3 Cache: 8 MB
Memory: 7 GB
Processor Interconnect Speed: 4.8 GT/s






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