Posts by Loki

1) Message boards : Number crunching : Minirosetta v1.28 bug thread (Message 53700)
Posted 15 Jun 2008 by Loki
Post:
http://boinc.bakerlab.org/rosetta/result.php?resultid=170582737

Runtime reference were set to 2 hours. After 4 hours i looked into the graphics. The structure was not folded, a long pearl chain. I aborted the workunit.
2) Message boards : Number crunching : minirosetta v1.25 bug thread (Message 53674)
Posted 13 Jun 2008 by Loki
Post:
http://boinc.bakerlab.org/rosetta/result.php?resultid=169646740

</stderr_txt>
<message>
<file_xfer_error>
<file_name>hom01_BOINC_CASP8_ABRELAX_t409_IGNORE_THE_REST-S25-7-S3-7--hom01-_3649_1045_1_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>
3) Message boards : Number crunching : minirosetta v1.25 bug thread (Message 53519)
Posted 2 Jun 2008 by Loki
Post:
http://boinc.bakerlab.org/rosetta/result.php?resultid=166970891


</stderr_txt>
<message>
<file_xfer_error>
<file_name>h003__BOINC_ABRELAXt407__IGNORE_THE_REST-S25-8-S3-5--h003_-_3340_694_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>
4) Message boards : Number crunching : minirosetta v1.25 bug thread (Message 53431)
Posted 29 May 2008 by Loki
Post:
Task ID 166675299
Name d110a_BOINC_CASP8_ABRELAX_t405_IGNORE_THE_REST-S25-11-S3-6--d110a-_3558_130_1
Workunit 152059622

stderr out

<core_client_version>5.10.30</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 7200
======================================================
DONE :: 1 starting structures 9196.03 cpu seconds
This process generated 1 decoys from 1 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...
called boinc_finish

</stderr_txt>
<message>
<file_xfer_error>
<file_name>d110a_BOINC_CASP8_ABRELAX_t405_IGNORE_THE_REST-S25-11-S3-6--d110a-_3558_130_1_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>
5) Message boards : Number crunching : Problems with Rosetta version 5.82 (Message 51747)
Posted 1 Mar 2008 by Loki
Post:
The last four post(including my post) seem to be a specific problem with AMD Cpus.
6) Message boards : Number crunching : Problems with Rosetta version 5.82 (Message 51746)
Posted 1 Mar 2008 by Loki
Post:
Task ID 144663870
Name CNTRL_01ABRELAX_SAVE_ALL_OUT_-1ubi_-_filters_1782_3286518_0
Workunit 131856501
CPU time 21.741262
stderr out <core_client_version>5.10.30</core_client_version>
<![CDATA[
<message>
Unzulš≥≥ige Funktion. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
# cpu_run_time_pref: 14400
# random seed: -7477
bad seed
ERROR:: Exit from: .dock_structure.cc line: 429

</stderr_txt>
]]>


7) Message boards : Number crunching : Always getting error (Message 30523)
Posted 2 Nov 2006 by Loki
Post:
The message says that the programm can not open/use a file, which is already used by another process.
8) Message boards : Rosetta@home Science : DISCUSSION of Rosetta@home Journal (2) (Message 30461)
Posted 1 Nov 2006 by Loki
Post:
Interactive Rosetta - good Idea! In this wu:

"FRA_t364_HOMOENV_hom001_6_t364_4_1s5uA_IGNORE_THE_REST_545_1324_8_0"

On the graphic display the red colored end is pointing from the main structure into the middle of nothere, but it may fit perfect into the blue colored section by wrapping the red end around the blue section. The algorithm does not find this solution. May be there is a high potential barrier between the starting point and this possible solution.

9) Message boards : Number crunching : Report stuck & aborted WU here please (Message 12662)
Posted 25 Mar 2006 by Loki
Post:
Stuck WU (Result ID = 14857109) at 17.5 % in AB initio calculation.






©2021 University of Washington
https://www.bakerlab.org