1)
Questions and Answers :
Unix/Linux :
Waiting for Memory
(Message 107514)
Posted 20 Oct 2022 by hawkless1 Post: ok with RAM Setting to 100% it is now crunching. and... there are suddenly 3 Jobs of Rosetta are running, bevor were two jobs "Wating for Memory", one job "displaced". 2066 /3808 MiB are now in USE of system RAM. outsourcing: 74MiB. :Thinking: 3 Jobs are using ~2GB RAM, but not one Job can Start, if the are 90% of 3.8GB (3427MiB) are free?? Thanks for the help |
2)
Questions and Answers :
Unix/Linux :
Waiting for Memory
(Message 107513)
Posted 20 Oct 2022 by hawkless1 Post: whith oher projects like LHC, Sidock, Einstein, Climateprediction, Milkyway, yoyo, or TN-Grid i dont have such a problem only with Rosetta since beginning of this Year. and if the Rosetta is waiting for Memory no other Project will be Crunched. i will add some more RAM, but the chips (Sticks) are sold out, and the delivery time is currently 14 weeks :-( before next year I will not get any additional RAM :-( |
3)
Questions and Answers :
Unix/Linux :
Waiting for Memory
(Message 107308)
Posted 13 Oct 2022 by hawkless1 Post: Starting the system: Do 13 Okt 2022 04:02:30 CEST | | Starting BOINC client version 7.16.6 for x86_64-pc-linux-gnu Do 13 Okt 2022 04:02:30 CEST | | log flags: file_xfer, sched_ops, task, cpu_sched Do 13 Okt 2022 04:02:30 CEST | | Libraries: libcurl/7.68.0 OpenSSL/1.1.1f zlib/1.2.11 brotli/1.0.7 libidn2/2.2.0 libpsl/0.21.0 (+libidn2/2.2.0) libssh/0.9.3/openssl/zlib nghttp2/1.40.0 librtmp/2.3 Do 13 Okt 2022 04:02:30 CEST | | Data directory: /var/lib/boinc-client Do 13 Okt 2022 04:02:31 CEST | | No usable GPUs found Do 13 Okt 2022 04:02:35 CEST | | libc: Ubuntu GLIBC 2.31-0ubuntu9.9 version 2.31 Do 13 Okt 2022 04:02:35 CEST | | Host name: Spider Do 13 Okt 2022 04:02:35 CEST | | Processor: 4 GenuineIntel Intel(R) Core(TM) i3-6100 CPU @ 3.70GHz [Family 6 Model 94 Stepping 3] Do 13 Okt 2022 04:02:35 CEST | | Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp tpr_shadow vnmi flexpriority ept vpid ept_ad fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid mpx rdseed adx smap clflushopt intel_pt xsaveopt xsavec xgetbv1 xsaves dtherm arat pln pts hwp hwp_notify hwp_act_window hwp_epp md_clear flush_l1d arch_capabilities Do 13 Okt 2022 04:02:35 CEST | | OS: Linux Ubuntu: Ubuntu 20.04.5 LTS [5.4.0-128-generic|libc 2.31 (Ubuntu GLIBC 2.31-0ubuntu9.9)] Do 13 Okt 2022 04:02:35 CEST | | Memory: 3.72 GB physical, 4.00 GB virtual Do 13 Okt 2022 04:02:35 CEST | | Disk: 191.19 GB total, 53.62 GB free Do 13 Okt 2022 04:02:35 CEST | | Local time is UTC +2 hours Do 13 Okt 2022 04:02:35 CEST | | VirtualBox version: 6.1.38_Ubuntur153438 Do 13 Okt 2022 04:02:35 CEST | | Config: GUI RPCs allowed from: Do 13 Okt 2022 04:02:35 CEST | | hawk-ntb.frotz.box Do 13 Okt 2022 04:02:35 CEST | | hawk2000.frotz.box Do 13 Okt 2022 04:02:35 CEST | | spider.frotz.box Do 13 Okt 2022 04:02:36 CEST | Einstein@Home | General prefs: from Einstein@Home (last modified 14-Aug-2022 10:31:17) Do 13 Okt 2022 04:02:36 CEST | Einstein@Home | Host location: none Do 13 Okt 2022 04:02:36 CEST | Einstein@Home | General prefs: using your defaults Do 13 Okt 2022 04:02:36 CEST | | Reading preferences override file Do 13 Okt 2022 04:02:36 CEST | | Preferences: Do 13 Okt 2022 04:02:36 CEST | | max memory usage when active: 3046.43 MB Do 13 Okt 2022 04:02:36 CEST | | max memory usage when idle: 3427.24 MB Do 13 Okt 2022 04:02:40 CEST | | max disk usage: 40.00 GB Do 13 Okt 2022 04:02:40 CEST | | max CPUs used: 3 Do 13 Okt 2022 04:02:40 CEST | | don't compute while active Do 13 Okt 2022 04:02:40 CEST | | don't use GPU while active Do 13 Okt 2022 04:02:40 CEST | | suspend work if non-BOINC CPU load exceeds 25% Do 13 Okt 2022 04:02:40 CEST | | (to change preferences, visit a project web site or select Preferences in the Manager) Do 13 Okt 2022 04:02:40 CEST | | Setting up project and slot directories Do 13 Okt 2022 04:02:40 CEST | | Checking active tasks Do 13 Okt 2022 04:02:40 CEST | | Using account manager BOINCstatsBAM! Do 13 Okt 2022 04:02:40 CEST | climateprediction.net | URL https://climateprediction.net/; Computer ID 149207x; resource share 2 Do 13 Okt 2022 04:02:40 CEST | Einstein@Home | URL http://einstein.phys.uwm.edu/; Computer ID 1278939x; resource share 1 Do 13 Okt 2022 04:02:40 CEST | GPUGRID | URL https://www.gpugrid.net/; Computer ID 53992x; resource share 100 Do 13 Okt 2022 04:02:40 CEST | LHC@home | URL https://lhcathome.cern.ch/lhcathome/; Computer ID 1061173x; resource share 21 Do 13 Okt 2022 04:02:40 CEST | Milkyway@Home | URL http://milkyway.cs.rpi.edu/milkyway/; Computer ID 85251x; resource share 24 Do 13 Okt 2022 04:02:40 CEST | Rosetta@home | URL https://boinc.bakerlab.org/rosetta/; Computer ID 378798x; resource share 100 Do 13 Okt 2022 04:02:40 CEST | SiDock@home | URL https://www.sidock.si/sidock/; Computer ID 2592x; resource share 110 Do 13 Okt 2022 04:02:40 CEST | TN-Grid Platform | URL http://gene.disi.unitn.it/test/; Computer ID 5215x; resource share 22 Do 13 Okt 2022 04:02:40 CEST | World Community Grid | URL http://www.worldcommunitygrid.org/; Computer ID 584781x; resource share 50 Do 13 Okt 2022 04:02:40 CEST | yoyo@home | URL http://www.rechenkraft.net/yoyo/; Computer ID 46790x; resource share 20 Do 13 Okt 2022 04:02:40 CEST | | Setting up GUI RPC socket Do 13 Okt 2022 04:02:40 CEST | | gui_rpc_auth.cfg is empty - no GUI RPC password protection Do 13 Okt 2022 04:02:40 CEST | | Checking presence of 343 project files Do 13 Okt 2022 04:07:53 CEST | | Contacting account manager at https://bam.boincstats.com/ Do 13 Okt 2022 04:07:55 CEST | | Account manager: BAM! User: 9744x, hawkless1 Do 13 Okt 2022 04:07:55 CEST | | Account manager: BAM! Host: 91285x Do 13 Okt 2022 04:07:55 CEST | | Account manager: Number of BAM! connections for this host: 715 Do 13 Okt 2022 04:07:55 CEST | | Account manager: Dear founder of team Lippe.NRW.de, your team is invited to participate in the team challenges (http://boincstats.com/en/bam/teamChallenge/) Do 13 Okt 2022 04:07:55 CEST | | Account manager contact succeeded Do 13 Okt 2022 08:11:16 CEST | LHC@home | Sending scheduler request: Requested by project. Do 13 Okt 2022 08:11:16 CEST | LHC@home | Not requesting tasks: don't need (job cache full) Do 13 Okt 2022 08:11:17 CEST | LHC@home | Scheduler request completed Do 13 Okt 2022 08:11:17 CEST | LHC@home | Project requested delay of 6 seconds last entry but in the manager ist the Rosetta jab (see abobe) aktive! [/img] |
4)
Questions and Answers :
Unix/Linux :
Waiting for Memory
(Message 107307)
Posted 13 Oct 2022 by hawkless1 Post: in my preferences i have Use RAM: when in Use 80% When not in Use 90% of Memmory installed is 4GB aktually in use .... then when i see there ist a Job from Rosetta Aktiv less then 10% cpu usage, less then 1GB Ram in use. the Job is aktiv and after 60 minutes there will no job cange be done, the system still waiting for this Job but nothing will be done the next JOB on what the problem is Anwendung Rosetta 4.20 Name 12mer_af_hallucinated_153_19_best_SAVE_ALL_OUT_2920368_554 Status Warten auf Speicher erhalten Di 11 Okt 2022 05:37:04 CEST Ablaufdatum Fr 14 Okt 2022 05:37:04 CEST Geschätzter Berechnungsaufwand 80.000 GFLOPs Prozessorzeit --- Prozessor-Zeit seit dem letzten Checkpoint --- bisherige Laufzeit --- Geschätzte verbleibende Zeit 07:59:40 Fortschritt 0,000% benötigter Arbeitsspeicher 0 bytes Größe des Arbeitspakets 0 bytes Verzeichnis slots/0 Ausführbare Datei rosetta_4.20_x86_64-pc-linux-gnu |
5)
Questions and Answers :
Unix/Linux :
Waiting for Memory
(Message 107276)
Posted 12 Oct 2022 by hawkless1 Post: Hello, I often saw that some Rosetta jobs did not start (0.00%). In the status column: Waiting for memory and the CPU is also underutilized (10% overall) how it is possible for the manager to download jobs when there is not enough memory available to run the job. In the past I canceled many jobs, also other jobs like SIDOC, Milkyway or LHC, because the Rosetta job worked 0% and all other jobs were blocked so that they passed the expiry date. I don't think it's right that one job blocks all the others because nothing is calculated! Operating System: Kubuntu 20.04 KDE Plasma Version: 5.18.8 KDE Frameworks Version: 5.68.0 Qt Version: 5.12.8 Kernel Version: 5.4.0-128-generic OS Type: 64-bit Processors: 4 × Intel® Core™ i3-6100 CPU @ 3.70GHz Memory: 3,7 GiB BOINC.Manager Version 7.16.6 (x64) wxWidgets version 3.0.4 Example: Anwendung Rosetta 4.20 Name 12mer_af_hallucinated_172_57_best_SAVE_ALL_OUT_2920568_412 Status Warten auf Speicher erhalten Mo 10 Okt 2022 13:26:17 CEST Ablaufdatum Do 13 Okt 2022 13:26:16 CEST Geschätzter Berechnungsaufwand 80.000 GFLOPs Prozessorzeit --- Prozessor-Zeit seit dem letzten Checkpoint --- bisherige Laufzeit --- Geschätzte verbleibende Zeit 07:59:39 Fortschritt 0,000% benötigter Arbeitsspeicher 0 bytes Größe des Arbeitspakets 0 bytes Verzeichnis slots/2 Ausführbare Datei rosetta_4.20_x86_64-pc-linux-gnu |
6)
Message boards :
Rosetta@home Science :
3 tasks, but no oune wil be crunched, "zur ausführung bereit"
(Message 106260)
Posted 24 May 2022 by hawkless1 Post: Hi everybody, i have 3 tasks in my manager an all three will not be crunched. at al three stands rady to work, PC runs in idle and nothing is happend all other projects i have stoped only Rosetta and SiDoc are aktiv. SiDoc is normaly crunching. any ideas? ex: Anwendung rosetta python projects 1.03 (vbox64) Name aagb-IDC_pp-NMPHE-GGLY-ACPenC12T_pp_6_2607826_6 Status Angehalten- Tageszeit erhalten Di 24 Mai 2022 02:53:04 CEST Ablaufdatum Fr 27 Mai 2022 02:53:03 CEST Geschätzter Berechnungsaufwand 80.000 GFLOPs Ausführbare Datei vboxwrapper_26198_x86_64-pc-linux-gnu --- Anwendung rosetta python projects 1.03 (vbox64) Name aaae-mNMPHE_pp-mNMABU_pp-mTIQ-mACHA14C_pp_2869360_6 Status Angehalten- Tageszeit erhalten Di 24 Mai 2022 02:53:04 CEST Ablaufdatum Fr 27 Mai 2022 02:53:03 CEST Geschätzter Berechnungsaufwand 80.000 GFLOPs Ausführbare Datei vboxwrapper_26198_x86_64-pc-linux-gnu Anwendung rosetta python projects 1.03 (vbox64) Name aaam-AZE_pp-mNMPHE-mVAL-AMACBEN2_pp_0_2427426_6 Status Angehalten- Tageszeit erhalten Mo 23 Mai 2022 18:17:22 CEST Ablaufdatum Do 26 Mai 2022 18:17:21 CEST Geschätzter Berechnungsaufwand 80.000 GFLOPs Prozessorzeit --- Prozessor-Zeit seit dem letzten Checkpoint --- bisherige Laufzeit --- Geschätzte verbleibende Zeit 06:41:02 Fortschritt 0,000% benötigter Arbeitsspeicher 0 bytes Größe des Arbeitspakets 0 bytes Verzeichnis slots/1 Ausführbare Datei vboxwrapper_26198_x86_64-pc-linux-gnu |
7)
Message boards :
Number crunching :
is that right R@H needs 19GB diskspace for WU
(Message 106251)
Posted 21 May 2022 by hawkless1 Post: Hi there i get the following masseage from my Boinc: "rosetta python projects needs 6937.95MB more disk space. You currently have 12135.54 MB available and it needs 19073.49 MB. Sa 21 Mai 2022 04:02:35 CEST " i Think 19073.49 MB (~19 GB) disk-space are needed is a litle much for a WU isn't it? |
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