-script_vars patchdock_res=9,23,40,43,44,45,47,69 -script_vars initial_sasa_threshold=1400 -beta_nov16 -script_vars targetpdb=target_pdb.pdb -dunbrack_prob_buried 0.8 -dunbrack_prob_nonburied 0.8 -dunbrack_prob_buried_semi 0.8 -dunbrack_prob_nonburied_semi 0.8 -silent_read_through_errors #-keep_input_scores False -silent_scores_wanted ID -write_failures False